Fold: CUB-like

sandwich, 10 strands in 2 sheets; jelly-roll

Lineage:

1. Root: scop
2. Class: All beta proteins [48724]
3. Fold: CUB-like [49853]
   sandwich, 10 strands in 2 sheets; jelly-roll

Superfamilies:

1. Spermadhesin, CUB domain [49854] (1)
   uperfamily
   1. Spermadhesin, CUB domain [49855] (6)
      1. Acidic seminal fluid protein (ASFP) [49856]
         1. Cow (Bos taurus) [TaxId: 9913] [49857] (1)
      2. Major seminal plasma glycoprotein PSP-I [49858]
         1. Pig (Sus scrofa) [TaxId: 9823] [49859] (1)
      3. Major seminal plasma glycoprotein PSP-II [49860]
         1. Pig (Sus scrofa) [TaxId: 9823] [49861] (1)
      4. Mannose-binding protein associated serine protease 2, MASP2 [89256]
         duplication: contains two CUB domains separated by an EGF-like domain
         1. Rat (Rattus norvegicus) [TaxId: 10116] [89257] (1)
         2. Human (Homo sapiens) [TaxId: 9606] [110137] (2)
            SQ O00187 17-181
      5. Complement C1S component [89258]
         1. Human (Homo sapiens) [TaxId: 9606] [89259] (1)
2. Collagen-binding domain [89260] (1)
   N-terminal strand appears only in calcium-free form
   uperfamily
   1. Collagen-binding domain [89261] (1)
      1. Class 1 collagenase [89262]
         1. Bacteria (Clostridium histolyticum) [TaxId: 1498] [89263] (4)
3. Acetamidase/Formamidase-like [141130] (1)
   decorated fold with additional structures; contains extra C-terminal alpha+beta subdomain: beta(2)-alpha(2)-beta(2): antiparallel beta-sheet, order 1243
   uperfamily
   1. Acetamidase/Formamidase-like [141131] (1)
      Pfam 03069
      1. Putative acetamidase TM0119 [141132]
         1. Thermotoga maritima [TaxId: 2336] [141133] (4)
            SQ Q9WXX3 1-283

Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009 Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk