Structural Classification of Proteins
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Family: UbiD middle domain-like

N terminal part of Pfam 01977; overall structural similarity to one subunit of the NADH:FMN oxidoreductase-like family (scop_fa 50482); not known to bind a flavin cofactor; also includes the N-terminal alpha+beta subdomain (~110 residues)

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Split barrel-like [50474]
    barrel; n=6, S=10; greek-key
  4. Superfamily: FMN-binding split barrel [50475]
    related to the ferredoxin reductase-like FAD-binding domain
    link to SUPERFAMILY database - Superfamily
  5. Family: UbiD middle domain-like [141368]
    N terminal part of Pfam 01977; overall structural similarity to one subunit of the NADH:FMN oxidoreductase-like family (scop_fa 50482); not known to bind a flavin cofactor; also includes the N-terminal alpha+beta subdomain (~110 residues)

Protein Domains:

  1. 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD [141369]
    1. Escherichia coli [TaxId: 562] [141370] (3)
      SQ P0AAB4 6-325
      1. 2idb picpicxrefxrefxref
        complexed with 1pe, edo
        1. region a:6-325 [137270] picpiclink
      2. 2idb picpicxrefxrefxref
        automatically matched to 2IDB A:6-325
        complexed with 1pe, edo
        1. region b:7-325 [137272] picpiclink
      3. 2idb picpicxrefxrefxref
        automatically matched to 2IDB A:6-325
        complexed with 1pe, edo
        1. region c:6-325 [137274] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk