Structural Classification of Proteins
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Protein: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) from Transmissible gastroenteritis virus [TaxId: 11149]

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Trypsin-like serine proteases [50493]
    barrel, closed; n=6, S=8; greek-key
    duplication: consists of two domains of the same fold
  4. Superfamily: Trypsin-like serine proteases [50494]
    link to SUPERFAMILY database - Superfamily
  5. Family: Viral cysteine protease of trypsin fold [50603]
  6. Protein: Coronavirus main proteinase (3Cl-pro, putative coronavirus nsp2) [74979]
    contains an extra alpha-helical domain
  7. Species: Transmissible gastroenteritis virus [TaxId: 11149] [74980]

PDB Entry Domains:

  1. 1lvo picpic
    complexed with dox, mpd, so4
    1. chain a [74284] picpiclink
    2. chain b [74285] picpiclink
    3. chain c [74286] picpiclink
    4. chain d [74287] picpiclink
    5. chain e [74288] picpiclink
    6. chain f [74289] picpiclink
  2. 1p9u picpic
    complexed with ch2, mpd, so4
    1. chain a [88001] picpiclink
    2. chain b [88002] picpiclink
    3. chain c [88003] picpiclink
    4. chain d [88004] picpiclink
    5. chain e [88005] picpiclink
    6. chain f [88006] picpiclink
  3. 2amp picpic
    automatically matched to d1lvod_
    complexed with i12
    1. region a:1-299 [127021] picpiclink
  4. 2amp picpic
    automatically matched to d1lvod_
    complexed with i12
    1. region b:1-299 [127022] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk