Structural Classification of Proteins
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Family: Retroviral protease (retropepsin)

dimer of identical mono-domain chains, each containing (6,10) barrel

Lineage:

  1. Root: scop
  2. Class: All beta proteins [48724]
  3. Fold: Acid proteases [50629]
    barrel, closed; n=6, S=10, complex topology
  4. Superfamily: Acid proteases [50630]
    link to SUPERFAMILY database - Superfamily
  5. Family: Retroviral protease (retropepsin) [50631]
    dimer of identical mono-domain chains, each containing (6,10) barrel

Protein Domains:

  1. Human immunodeficiency virus type 1 protease [50632]
    1. Human immunodeficiency virus type 1 [TaxId: 11676] [50633] (317) picpic
      SQ P35963 57-155 ! SQ P04587 69-167 ! SQ P03366 69-167 ! SQ P03367 69-167 ! SQ P03368 69-167
  2. Human immunodeficiency virus type 2 (HIV-2) protease [50634]
    1. Human immunodeficiency virus type 2 [TaxId: 11709] [50635] (21) picpic
  3. Simian immunodeficiency virus (SIV) protease [50636]
    1. Simian immunodeficiency virus, different strains [TaxId: 11723] [50637] (18) picpic
  4. Feline immunodeficiency virus (FIV) protease [50638]
    1. Feline immunodeficiency virus [TaxId: 11673] [50639] (7) picpic
  5. Rous sarcoma virus protease [50640]
    1. Rous sarcoma virus, strain pr-C [TaxId: 11886] [50641] (2) picpic
  6. Myeloblastosis-associated viral protease [50642]
    1. Avian myeloblastosis associated virus [TaxId: 11960] [50643] (1) picpic
  7. EIAV protease [50644]
    1. Equine infectious anemia virus [TaxId: 11665] [50645] (2) picpic
  8. Mason-Pfizer monkey virus protease [82131]
    1. Simian retrovirus 1, SRV-1 [TaxId: 11942] [82132] (1) picpic
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk