Structural Classification of Proteins
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Superfamily: Triosephosphate isomerase (TIM)

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: Triosephosphate isomerase (TIM) [51351]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Triosephosphate isomerase (TIM) [51352] (18)
    1. Triosephosphate isomerase [51353]
      1. Chicken (Gallus gallus) [TaxId: 9031] [51354] (16) picpic
        SQ P00940
      2. Human (Homo sapiens) [TaxId: 9606] [51355] (5) picpic
      3. Rabbit (Oryctolagus cuniculus) [TaxId: 9986] [102035] (3) picpic
      4. Nematode (Caenorhabditis elegans) [TaxId: 6239] [82235] (1) picpic
      5. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [51356] (7) picpic
      6. Trypanosoma brucei [TaxId: 5691] [51357] (19) picpic
      7. Trypanosoma cruzi [TaxId: 5693] [51358] (5) picpic
        SQ P52270
      8. Plasmodium falciparum [TaxId: 5833] [51359] (9) picpic
        SQ Q07412
      9. Leishmania mexicana [TaxId: 5665] [51360] (4) picpic
      10. Entamoeba histolytica [TaxId: 5759] [82236] (1) picpic
      11. Escherichia coli [TaxId: 562] [51361] (1) picpic
      12. Synthetic, hybrid between Escherichia coli and chicken TIM [51362] (1) picpic
      13. Bacillus stearothermophilus [TaxId: 1422] [51363] (2) picpic
      14. Vibrio marinus [TaxId: 90736] [51364] (2) picpic
      15. Thermotoga maritima [TaxId: 2336] [51365] (1) picpic
      16. Archaeon Pyrococcus woesei [TaxId: 2262] [63891] (1) picpic
      17. Thermoproteus tenax [TaxId: 2271] [110342] (1) picpic
        SQ Q8NKN9
      18. Trypanosoma (Trypanozoon) brucei brucei (Trypanosoma brucei brucei) [TaxId: 39700] [159375] (2) picpic
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk