Structural Classification of Proteins
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Protein: AMP deaminase (AMPD), catalytic domain from Thale cress (Arabidopsis thaliana) [TaxId: 3702]

SQ O80452 212-839

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: Metallo-dependent hydrolases [51556]
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
    link to SUPERFAMILY database - Superfamily
  5. Family: Adenosine/AMP deaminase [51557]
  6. Protein: AMP deaminase (AMPD), catalytic domain [141800]
    elaborated fold with additional structures
  7. Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702] [141801]
    SQ O80452 212-839

PDB Entry Domains:

  1. 2a3l picpic
    complexed with cf5, po4, zn
    1. region a:212-839 [126091] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk