Structural Classification of Proteins
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Family: alpha-subunit of urease, catalytic domain

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: Metallo-dependent hydrolases [51556]
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
    link to SUPERFAMILY database - Superfamily
  5. Family: alpha-subunit of urease, catalytic domain [51560]

Protein Domains:

  1. alpha-subunit of urease, catalytic domain [51561]
    1. Klebsiella aerogenes [TaxId: 28451] [51562] (27)
      1. 1ejx picpicxrefxrefxref
        complexed with kcx, ni
        1. region c:1130-1422,c:1476-1567 [83185] picpiclink
      2. 1ejr picpicxrefxrefxref
        complexed with ni; mutant
        1. region c:1130-1422,c:1476-1567 [29042] picpiclink
      3. 1fwc picpicxrefxrefxref
        complexed with ni; mutant
        1. region c:130-422,c:476-567 [29032] picpiclink
      4. 1ejt picpicxrefxrefxref
        complexed with ni; mutant
        1. region c:1130-1422,c:1476-1567 [29043] picpiclink
      5. 1fwa picpicxrefxrefxref
        complexed with co3, ni; mutant
        1. region c:130-422,c:476-567 [29030] picpiclink
      6. 1fwd picpicxrefxrefxref
        complexed with ni; mutant
        1. region c:130-422,c:476-567 [29033] picpiclink
      7. 1fwb picpicxrefxrefxref
        complexed with ni; mutant
        1. region c:130-422,c:476-567 [29031] picpiclink
      8. 1fwi picpicxrefxrefxref
        complexed with ni; mutant
        1. region c:130-422,c:476-567 [29029] picpiclink
      9. 1fwf picpicxrefxrefxref
        complexed with ni; mutant
        1. region c:130-422,c:476-567 [29028] picpiclink
      10. 1ejw picpicxrefxrefxref
        complexed with ni
        1. region c:1130-1422,c:1476-1567 [90456] picpiclink
      11. 1fwg picpicxrefxrefxref
        complexed with ni; mutant
        1. region c:130-422,c:476-567 [29035] picpiclink
      12. 2kau picpicxrefxrefxref
        CASP1
        complexed with cbx, ni
        1. region c:130-422,c:476-567 [29034] picpiclink
      13. 1fwh picpicxrefxrefxref
        complexed with ni; mutant
        1. region c:130-422,c:476-567 [29036] picpiclink
      14. 1eju picpicxrefxrefxref
        complexed with ni; mutant
        1. region c:1130-1422,c:1476-1567 [29044] picpiclink
      15. 1ejs picpicxrefxrefxref
        complexed with ni; mutant
        1. region c:1130-1422,c:1476-1567 [29046] picpiclink
      16. 1a5m picpicxrefxrefxref
        mutant
        1. region c:130-422,c:476-567 [29045] picpiclink
      17. 1fwe picpicxrefxrefxref
        complexed with hae, ni; mutant
        1. region c:130-422,c:476-567 [29037] picpiclink
      18. 1fwj picpicxrefxrefxref
        complexed with ni
        1. region c:130-422,c:476-567 [29038] picpiclink
      19. 1a5k picpicxrefxrefxref
        mutant
        1. region c:130-422,c:476-567 [29047] picpiclink
      20. 1a5l picpicxrefxrefxref
        mutant
        1. region c:130-422,c:476-567 [29048] picpiclink
      21. 1a5n picpicxrefxrefxref
        complexed with fmt, ni; mutant
        1. region c:130-422,c:476-567 [29049] picpiclink
      22. 1ejv picpicxrefxrefxref
        complexed with ni; mutant
        1. region c:1130-1422,c:1476-1567 [29050] picpiclink
      23. 1kra picpicxrefxrefxref
        1. region c:130-422,c:476-567 [29039] picpiclink
      24. 1ef2 picpicxrefxrefxref
        complexed with mn
        1. region a:1130-1422,a:1476-1567 [29051] picpiclink
      25. 1krc picpicxrefxrefxref
        complexed with co2, ni; mutant
        1. region c:130-422,c:476-567 [29041] picpiclink
      26. 1krb picpicxrefxrefxref
        complexed with co2, ni; mutant
        1. region c:130-422,c:476-567 [29040] picpiclink
      27. 1a5o picpicxrefxrefxref
        complexed with fmt, ni; mutant
        1. region c:130-422,c:476-567 [29052] picpiclink
    2. Bacillus pasteurii [TaxId: 1474] [51563] (6)
      1. 4ubp picpicxrefxrefxref
        complexed with ace, hae, ni
        1. region c:132-434,c:484-570 [29053] picpiclink
      2. 1ubp picpicxrefxrefxref
        complexed with bme, cbx, ni
        1. region c:132-434,c:484-570 [29054] picpiclink
      3. 1ie7 picpicxrefxrefxref
        complexed with ni, po4
        1. region c:132-434,c:484-570 [62316] picpiclink
      4. 2ubp picpicxrefxrefxref
        1. region c:132-434,c:484-570 [29055] picpiclink
      5. 3ubp picpicxrefxrefxref
        1. region c:132-434,c:484-570 [29056] picpiclink
      6. 1s3t picpicxrefxrefxref
        complexed with bo3, ni, so4
        1. region c:132-434,c:484-570 [98463] picpiclink
    3. Helicobacter pylori [TaxId: 210] [69393] (2)
      1. 1e9y picpicxrefxrefxref
        complexed with hae, ni
        1. region b:132-431,b:481-569 [64849] picpiclink
      2. 1e9z picpicxrefxrefxref
        complexed with ni
        1. region b:132-431,b:481-569 [64853] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk