Structural Classification of Proteins
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Protein: alpha-subunit of urease, catalytic domain from Helicobacter pylori [TaxId: 210]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: Metallo-dependent hydrolases [51556]
    the beta-sheet barrel is similarly distorted and capped by a C-terminal helix
    has transition metal ions bound inside the barrel
    link to SUPERFAMILY database - Superfamily
  5. Family: alpha-subunit of urease, catalytic domain [51560]
  6. Protein: alpha-subunit of urease, catalytic domain [51561]
  7. Species: Helicobacter pylori [TaxId: 210] [69393]

PDB Entry Domains:

  1. 1e9y picpicxrefxrefxref
    complexed with hae, ni
    1. region b:132-431,b:481-569 [64849] picpiclink
  2. 1e9z picpicxrefxrefxref
    complexed with ni
    1. region b:132-431,b:481-569 [64853] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk