Structural Classification of Proteins
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Protein: N-acetylneuraminate lyase from Escherichia coli [TaxId: 562]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: Aldolase [51569]
    Common fold covers whole protein structure
    link to SUPERFAMILY database - Superfamily
  5. Family: Class I aldolase [51570]
    the catalytic lysine forms schiff-base intermediate with substrate
    possible link between the aldolase superfamily and the phosphate-binding beta/alpha barrels
  6. Protein: N-acetylneuraminate lyase [51571]
  7. Species: Escherichia coli [TaxId: 562] [51572]

PDB Entry Domains:

  1. 1hl2 picpic
    complexed with 3py; mutant
    1. chain a [83581] picpiclink
    2. chain b [83582] picpiclink
    3. chain c [83583] picpiclink
    4. chain d [83584] picpiclink
  2. 1nal picpic
    complexed with so4
    1. chain 1 [29067] picpiclink
    2. chain 2 [29068] picpiclink
    3. chain 3 [29069] picpiclink
    4. chain 4 [29070] picpiclink
  3. 1fdy picpic
    complexed with 3py
    1. chain a [29071] picpiclink
    2. chain b [29072] picpiclink
    3. chain c [29073] picpiclink
    4. chain d [29074] picpiclink
  4. 1fdz picpic
    complexed with pyr
    1. chain a [29075] picpiclink
    2. chain b [29076] picpiclink
    3. chain c [29077] picpiclink
    4. chain d [29078] picpiclink

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MRC
site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk