Structural Classification of Proteins
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Protein: Ribulose 1,5-bisphosphate carboxylase-oxygenase from Spinach (Spinacia oleracea) [TaxId: 3562]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: RuBisCo, C-terminal domain [51649]
    link to SUPERFAMILY database - Superfamily
  5. Family: RuBisCo, large subunit, C-terminal domain [51650]
    N-terminal domain is alpha+beta
  6. Protein: Ribulose 1,5-bisphosphate carboxylase-oxygenase [51651]
  7. Species: Spinach (Spinacia oleracea) [TaxId: 3562] [51653]

PDB Entry Domains:

  1. 8ruc picpicxrefxref
    complexed with cap, mg
    1. region a:148-475 [29339] picpiclink
    2. region c:148-475 [29340] picpiclink
    3. region e:148-475 [29341] picpiclink
    4. region g:148-475 [29342] picpiclink
  2. 1ir1 picpicxrefxref
    complexed with cap, kcx, mg, mme
    1. region a:148-475 [71282] picpiclink
    2. region b:148-475 [71284] picpiclink
    3. region c:148-475 [71286] picpiclink
    4. region d:148-475 [71288] picpiclink
  3. 1rbo picpicxrefxref
    complexed with cap
    1. region l:148-475 [29343] picpiclink
    2. region b:148-475 [29344] picpiclink
    3. region e:148-475 [29345] picpiclink
    4. region h:148-475 [29346] picpiclink
  4. 1aa1 picpicxrefxref
    complexed with 3pg, mg
    1. region l:148-463 [29347] picpiclink
    2. region b:148-463 [29348] picpiclink
    3. region e:148-463 [29349] picpiclink
    4. region h:148-463 [29350] picpiclink
  5. 1rxo picpicxrefxref
    complexed with ca, rub
    1. region l:148-463 [29351] picpiclink
    2. region b:148-463 [29352] picpiclink
    3. region e:148-463 [29353] picpiclink
    4. region h:148-463 [29354] picpiclink
  6. 1aus picpicxrefxrefxrefxrefxrefxrefxrefxref
    complexed with cbx, mg
    1. region l:148-463 [29355] picpiclink
  7. 1aus picpicxrefxrefxrefxrefxrefxrefxrefxref
    duplicate of 1AUS L:148-463
    complexed with cbx, mg
    1. region m:148-463 [118409] picpiclink
  8. 1aus picpicxrefxrefxrefxrefxrefxrefxrefxref
    duplicate of 1AUS L:148-463
    complexed with cbx, mg
    1. region n:148-463 [118411] picpiclink
  9. 1aus picpicxrefxrefxrefxrefxrefxrefxrefxref
    duplicate of 1AUS L:148-463
    complexed with cbx, mg
    1. region o:148-463 [118413] picpiclink
  10. 1rco picpicxrefxref
    complexed with xdp
    1. region l:148-475 [29356] picpiclink
    2. region b:148-475 [29357] picpiclink
    3. region e:148-475 [29358] picpiclink
    4. region h:148-475 [29359] picpiclink
    5. region k:148-475 [29360] picpiclink
    6. region o:148-475 [29361] picpiclink
    7. region r:148-475 [29362] picpiclink
    8. region v:148-475 [29363] picpiclink
  11. 1rcx picpicxrefxref
    complexed with rub
    1. region l:148-475 [29364] picpiclink
    2. region b:148-475 [29365] picpiclink
    3. region e:148-475 [29366] picpiclink
    4. region h:148-475 [29367] picpiclink
    5. region k:148-475 [29368] picpiclink
    6. region o:148-475 [29369] picpiclink
    7. region r:148-475 [29370] picpiclink
    8. region v:148-475 [29371] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk