Structural Classification of Proteins
home mail help root up expand collapse

Superfamily: Xylose isomerase-like

different families share similar but non-identical metal-binding sites
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: Xylose isomerase-like [51658]
    different families share similar but non-identical metal-binding sites
    link to SUPERFAMILY database - Superfamily

Families:

  1. Endonuclease IV [51659] (2)
    1. Endonuclease IV [51660]
      DNA repair enzyme
      1. Escherichia coli [TaxId: 562] [51661] (2) picpic
      2. Bacillus anthracis [TaxId: 1392] [141851] (1) picpic
        SQ Q81LV1 2-298
  2. IolI-like [75090] (3)
    1. Hypothetical protein IolI [75091]
      1. Bacillus subtilis [TaxId: 1423] [75092] (2) picpic
    2. Hypothetical protein Lmo2234 [141852]
      1. Listeria monocytogenes [TaxId: 1639] [141853] (2) picpic
        SQ Q8Y542 10-284
    3. Putative cytoplasmic protein STM4435 [159419]
      1. Salmonella typhimurium [TaxId: 90371] [159420] (1) picpic
        SQ Q8ZK48 1-271
  3. Hypothetical protein YgbM (EC1530) [75093] (1)
    1. Hypothetical protein YgbM (EC1530) [75094]
      1. Escherichia coli [TaxId: 562] [75095] (1) picpic
  4. L-rhamnose isomerase [51662] (1)
    1. L-rhamnose isomerase [51663]
      1. Escherichia coli [TaxId: 562] [51664] (3) picpic
  5. Xylose isomerase [51665] (12)
    1. D-xylose isomerase [51666]
      1. Streptomyces albus [TaxId: 1888] [51667] (1) picpic
      2. Streptomyces murinus [TaxId: 33900] [51668] (1) picpic
      3. Streptomyces olivochromogenes [TaxId: 1963] [51669] (9) picpic
      4. Streptomyces rubiginosus [TaxId: 1929] [51670] (24) picpic
      5. Streptomyces diastaticus, M1033 [TaxId: 1956] [51671] (2) picpic
      6. Arthrobacter, strain b3728 [TaxId: 1663] [51672] (17) picpic
      7. Actinoplanes missouriensis [TaxId: 1866] [51673] (14) picpic
      8. Clostridium thermosulfurogenes, also known as Thermoanaerobacter thermosulfurigenes [TaxId: 33950] [51674] (1) picpic
      9. Bacillus stearothermophilus [TaxId: 1422] [51675] (1) picpic
      10. Thermotoga neapolitana [TaxId: 2337] [51676] (1) picpic
      11. Thermus aquaticus, subsp. Caldophilus [TaxId: 271] [51677] (1) picpic
      12. Thermus aquaticus, subsp. Thermophilus [TaxId: 271] [51678] (1) picpic
  6. UxuA-like [110377] (1)
    Pfam 03786
    1. Mannonate dehydratase UxuA [110378]
      1. Enterococcus faecalis (Streptococcus faecalis) [TaxId: 1351] [110379] (1) picpic
        SQ Q82ZC9
  7. KguE-like [141854] (1)
    part of Pfam 01261
    1. Hypothetical protein PA2260 [141855]
      2-ketogluconate utilization operon protein KguE
      1. Pseudomonas aeruginosa [TaxId: 287] [141856] (3) picpic
        SQ Q9I1L3 3-252
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk