Structural Classification of Proteins
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Protein: D-xylose isomerase from Streptomyces rubiginosus [TaxId: 1929]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: Xylose isomerase-like [51658]
    different families share similar but non-identical metal-binding sites
    link to SUPERFAMILY database - Superfamily
  5. Family: Xylose isomerase [51665]
  6. Protein: D-xylose isomerase [51666]
  7. Species: Streptomyces rubiginosus [TaxId: 1929] [51670]

PDB Entry Domains:

  1. 2glk picpic
    automatically matched to d1mnza_
    complexed with gol, mn
    1. region a:2-388 [135344] picpiclink
  2. 1mnz picpic
    atomic resolution structure
    complexed with ca, mg, mpd, trs
    1. chain a [79328] picpiclink
  3. 1o1h picpic
    complexed with ca, cl, kr, mg, mpd, trs
    1. chain a [81044] picpiclink
    2. chain b [81045] picpiclink
  4. 1oad picpic
    complexed with mo1, mpd, mqd, mrd, mw1, trs
    1. chain a [81253] picpiclink
    2. chain b [81254] picpiclink
  5. 4xis picpic
    complexed with mn, xls, xys
    1. chain a [29421] picpiclink
  6. 1gw9 picpic
    complexed with ca, iod, lxc
    1. chain a [70658] picpiclink
  7. 1xis picpic
    complexed with mn
    1. chain a [29422] picpiclink
  8. 3xis picpic
    complexed with mg, xls, xys
    1. chain a [29423] picpiclink
  9. 1xic picpic
    complexed with mn, xls
    1. chain a [29425] picpiclink
  10. 1xib picpic
    complexed with mn
    1. chain a [29424] picpiclink
  11. 2xis picpic
    complexed with mg, xyl
    1. chain a [29427] picpiclink
  12. 1xif picpic
    complexed with glc, mn
    1. chain a [29426] picpiclink
  13. 1xii picpic
    complexed with mn, xul
    1. chain a [29428] picpiclink
  14. 1xid picpic
    complexed with asc, mn
    1. chain a [29431] picpiclink
  15. 1xij picpic
    complexed with mn, the
    1. chain a [29429] picpiclink
  16. 2g4j picpic
    automatically matched to d1mnza_
    complexed with ca, cl, mg
    1. region a:1-386 [134596] picpiclink
  17. 2gub picpic
    automatically matched to d1mnza_
    1. region a:3-387 [135729] picpiclink
  18. 1xig picpic
    complexed with mn, xyl
    1. chain a [29432] picpiclink
  19. 1xih picpic
    complexed with mn, sor
    1. chain a [29430] picpiclink
  20. 1xie picpic
    complexed with aso, mn
    1. chain a [29433] picpiclink
  21. 9xia picpic
    complexed with dfr, mn
    1. chain a [29434] picpiclink
  22. 8xia picpic
    complexed with mn, xls
    1. chain a [29435] picpiclink
  23. 3cwh picpic
    automatically matched to d1mnza_
    complexed with mg, oh, xul
    1. region a:2-388 [157051] picpiclink
  24. 2gve picpic
    automatically matched to d1mnza_
    complexed with co
    1. region a:2-388 [135775] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk