Structural Classification of Proteins
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Family: Decarboxylase

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: Ribulose-phoshate binding barrel [51366]
    link to SUPERFAMILY database - Superfamily
  5. Family: Decarboxylase [51375]

Protein Domains:

  1. Orotidine 5'-monophosphate decarboxylase (OMP decarboxylase) [51376]
    1. Bacillus subtilis [TaxId: 1423] [51377] (1) picpic
    2. Escherichia coli [TaxId: 562] [51378] (3) picpic
    3. Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262] [51379] (20) picpic
    4. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [51380] (2) picpic
    5. Thermotoga maritima [TaxId: 2336] [141746] (1) picpic
      SQ Q9WYG7 1-198
    6. Plasmodium vivax [TaxId: 5855] [141747] (1) picpic
    7. Pyrococcus horikoshii [TaxId: 53953] [141748] (8) picpic
      SQ O58462 1-208
  2. 3-keto-L-gulonate 6-phosphate decarboxylase [75050]
    1. Escherichia coli [TaxId: 562] [75051] (18) picpic
      SQ P39304
  3. Protozoan orotidine monophosphate decarboxylase [141749]
    1. Plasmodium vivax [TaxId: 5855] [141750] (1) picpic
    2. Plasmodium falciparum [TaxId: 5833] [141751] (2) picpic
      SQ Q8T6J6 1-323
    3. Plasmodium berghei [TaxId: 5821] [141752] (2) picpic
      SQ Q4Z4C3 2-325
    4. Plasmodium yoelii [TaxId: 5861] [141753] (1) picpic
      SQ Q7RPE4 2-322
    5. Plasmodium falciparum (isolate 3D7) (Plasmodium falciparum 3D7) [TaxId: 36329] [159376] (14) picpic
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk