Structural Classification of Proteins
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Protein: D-lysine 5,6-aminomutase alpha subunit, KamD from Clostridium sticklandii [TaxId: 1511]

SQ Q9ZFE6

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: Cobalamin (vitamin B12)-dependent enzymes [51703]
    link to SUPERFAMILY database - Superfamily
  5. Family: D-lysine 5,6-aminomutase alpha subunit, KamD [117392]
    most similar to the glutamate mutase subunit; contains second cofactor, PLP
  6. Protein: D-lysine 5,6-aminomutase alpha subunit, KamD [117393]
  7. Species: Clostridium sticklandii [TaxId: 1511] [117394]
    SQ Q9ZFE6

PDB Entry Domains:

  1. 1xrs picpicxrefxref
    complexed with 5ad, b12, plp
    1. chain a [115883] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk