Structural Classification of Proteins
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Protein: Fungal alpha-amylases from Aspergillus oryzae, Taka-amylase [TaxId: 5062]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: (Trans)glycosidases [51445]
    link to SUPERFAMILY database - Superfamily
  5. Family: Amylase, catalytic domain [51446]
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. Protein: Fungal alpha-amylases [51462]
  7. Species: Aspergillus oryzae, Taka-amylase [TaxId: 5062] [51464]

PDB Entry Domains:

  1. 2guy picpicxref
    automatically matched to d6taa_2
    complexed with bma, ca, nag
    1. region a:1-381 [135755] picpiclink
  2. 2gvy picpicxrefxref
    automatically matched to d6taa_2
    complexed with ca, glc, nag
    1. region a:1-381 [135794] picpiclink
  3. 2gvy picpicxrefxref
    automatically matched to d6taa_2
    complexed with ca, glc, nag
    1. region b:1-381 [135796] picpiclink
  4. 7taa picpicxref
    complexed with abc, ca
    1. region a:1-381 [28765] picpiclink
  5. 6taa picpicxref
    complexed with ca
    1. region a:1-381 [28766] picpiclink
  6. 2taa picpicxrefxrefxref
    complexed with ca
    1. region a:1-381 [28767] picpiclink
  7. 2taa picpicxrefxrefxref
    duplicate of 2TAA A:1-381
    complexed with ca
    1. region b:1-381 [118673] picpiclink
  8. 2taa picpicxrefxrefxref
    duplicate of 2TAA A:1-381
    complexed with ca
    1. region c:1-381 [118675] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk