Structural Classification of Proteins
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Protein: Bacterial alpha-amylase from Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: (Trans)glycosidases [51445]
    link to SUPERFAMILY database - Superfamily
  5. Family: Amylase, catalytic domain [51446]
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. Protein: Bacterial alpha-amylase [51447]
  7. Species: Pseudoalteromonas haloplanktis (Alteromonas haloplanktis) [TaxId: 228] [51449]

PDB Entry Domains:

  1. 1g94 picpicxref
    complexed with ca, cl, daf, glc, trs
    1. region a:1-354 [65170] picpiclink
  2. 1aqm picpicxref
    complexed with ca, cl, trs
    1. region a:1-354 [28704] picpiclink
  3. 1g9h picpicxref
    complexed with ca, cl, daf, glc, trs
    1. region a:1-354 [70163] picpiclink
  4. 1aqh picpicxref
    complexed with ca, cl
    1. region a:1-354 [28705] picpiclink
  5. 1l0p picpicxref
    complexed with ca, no3
    1. region a:1-354 [73407] picpiclink
  6. 1kxh picpicxref
    complexed with acr, ca, cl; mutant
    1. region a:1-354 [73152] picpiclink
  7. 1jd7 picpicxref
    complexed with ca, cl; mutant
    1. region a:1-354 [77105] picpiclink
  8. 1b0i picpicxref
    1. region a:1-354 [28706] picpiclink
  9. 1jd9 picpicxref
    complexed with ca; mutant
    1. region a:1-354 [77107] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk