Structural Classification of Proteins
home mail help root up expand collapse

Protein: Plant alpha-amylase from Barley (Hordeum vulgare), seeds, AMY2 isozyme [TaxId: 4513]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: (Trans)glycosidases [51445]
    link to SUPERFAMILY database - Superfamily
  5. Family: Amylase, catalytic domain [51446]
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. Protein: Plant alpha-amylase [51474]
  7. Species: Barley (Hordeum vulgare), seeds, AMY2 isozyme [TaxId: 4513] [51475]

PDB Entry Domains:

  1. 1ava picpicxrefxref
    complexed with ca
    1. region a:1-346 [28784] picpiclink
    2. region b:1-346 [28785] picpiclink
  2. 1bg9 picpicxref
    complexed with af1, ca, daf, glc
    1. region a:1-346 [28787] picpiclink
  3. 1amy picpicxref
    complexed with ca
    1. region a:1-346 [28786] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk