Structural Classification of Proteins
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Protein: beta-Amylase from Sweet potato (Ipomoea batatas) [TaxId: 4120]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: (Trans)glycosidases [51445]
    link to SUPERFAMILY database - Superfamily
  5. Family: Amylase, catalytic domain [51446]
    members of the family may contain various insert subdomains
    in alpha-amylases and closer relatives this domain is usually followed by a common all-beta domain
  6. Protein: beta-Amylase [51481]
    Common fold covers whole protein structure
  7. Species: Sweet potato (Ipomoea batatas) [TaxId: 4120] [51484]

PDB Entry Domains:

  1. 1fa2 picpic
    complexed with dom, dtt
    1. chain a [28797] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk