Structural Classification of Proteins
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Family: beta-glycanases

consist of a number of sequence families

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: TIM beta/alpha-barrel [51350]
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. Superfamily: (Trans)glycosidases [51445]
    link to SUPERFAMILY database - Superfamily
  5. Family: beta-glycanases [51487]
    consist of a number of sequence families

Protein Domains:

  1. Xylanase [51488]
    1. Clostridium thermocellum, XynZ [TaxId: 1515] [51489] (1) picpic
      belongs to family F
    2. Bacillus stearothermophilus, Xt6 [TaxId: 1422] [69386] (4) picpic
      SQ P40943
    3. Bacillus stearothermophilus, Ixt6 [TaxId: 1422] [102063] (1) picpic
      intra-cellular xylanase
    4. Cellvibrio mixtus [TaxId: 39650] [102064] (4) picpic
    5. Penicillium simplicissimum [TaxId: 69488] [51490] (1) picpic
      belongs to family 10
    6. Thermotoga maritima [TaxId: 2336] [141772] (4) picpic
      SQ Q9WXS5 23-346
  2. Endoglucanase CelA [51491]
    1. Clostridium cellulolyticum [TaxId: 1521] [51492] (1) picpic
  3. Endoglucanase CelC [51493]
    1. Clostridium thermocellum [TaxId: 1515] [51494] (3) picpic
  4. Exo-beta-(1,3)-glucanase [51495]
    1. Yeast (Candida albicans) [TaxId: 5476] [51496] (4) picpic
    2. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [102065] (1) picpic
  5. Endoglucanase homologue TM1752 [102066]
    1. Thermotoga maritima [TaxId: 2336] [102067] (1) picpic
  6. Endocellulase E1 [51497]
    1. Acidothermus cellulolyticus [TaxId: 28049] [51498] (3) picpic
  7. Endocellulase EngI [75066]
    1. Thermoascus aurantiacus [TaxId: 5087] [75067] (2) picpic
  8. Endoglucanase Cel5a [51499]
    1. Bacillus agaradhaerens [TaxId: 76935] [51500] (20) picpic
      SQ O85465 30-329
    2. Erwinia chrysanthemi [TaxId: 556] [51501] (1) picpic
    3. Bacillus subtilis [TaxId: 1423] [75068] (1) picpic
    4. Pseudoalteromonas haloplanktis [TaxId: 228] [141773] (4) picpic
      SQ O86099 33-325
  9. Alkaline cellulase K catalytic domain [63906]
    1. Bacillus sp. [TaxId: 1409] [63907] (2) picpic
  10. Beta-mannanase [51502]
    1. Thermomonospora fusca [TaxId: 2021] [51503] (3) picpic
    2. Trichoderma reesei [TaxId: 51453] [51504] (5) picpic
    3. Tomato (Lycopersicon esculentum) [TaxId: 4081] [141774] (1) picpic
      SQ Q93WT4 30-399
    4. Bacillus sp. JAMB-602 [TaxId: 244966] [141775] (1) picpic
      SQ Q4W8M3 34-490
      contains additional C-terminal domain (CBM)
  11. Exomannosidase [102068]
    mannosyl-oligosaccharide glucosidase
    1. Cellvibrio mixtus [TaxId: 39650] [102069] (2) picpic
      SQ Q6QT42 46-455
  12. Beta-1,4-galactanase [89469]
    1. Fungus (Aspergillus aculeatus) [TaxId: 5053] [89470] (2) picpic
    2. Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579] [89471] (2) picpic
      Myceliophthora thermophila is the anamorph name whilst Thielavia heterothallica is the teleomorph name
    3. Humicola insolens [TaxId: 34413] [89472] (1) picpic
    4. Bacillus licheniformis [TaxId: 1402] [117367] (7) picpic
      SQ Q65CX5 36-422 ! SQ Q65CX5 28-424
  13. Mannanase A, ManA [63908]
    1. Pseudomonas cellulosa (Cellvibrio japonicus) [TaxId: 155077] [63909] (5) picpic
    2. Cellulomonas fimi [TaxId: 1708] [141776] (3) picpic
      SQ Q9XCV5 55-420
  14. Plant beta-glucanases [51507]
    1. Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513] [51508] (1) picpic
    2. Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513] [51509] (2) picpic
    3. Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641] [141777] (1) picpic
      SQ O22317 29-340
  15. beta-Galactosidase, domain 3 [51510]
    1. Escherichia coli [TaxId: 562] [51511] (25) picpic
      SQ P00722
    2. Arthrobacter sp. c2-2 [TaxId: 192168] [141778] (6) picpic
      SQ Q8KRF6 313-609
  16. beta-Glucuronidase, domain 3 [51512]
    1. Human (Homo sapiens) [TaxId: 9606] [51513] (1) picpic
  17. Xylanase A, catalytic core [51514]
    1. Streptomyces lividans [TaxId: 1916] [51515] (9) picpic
      SQ P26514 43-344
    2. Penicillium simplicissimum [TaxId: 69488] [51516] (7) picpic
    3. Pseudomonas fluorescens [TaxId: 294] [51517] (8) picpic
      SQ P14768 265-610
    4. Thermoascus aurantiacus [TaxId: 5087] [51518] (10) picpic
    5. Streptomyces olivaceoviridis [TaxId: 1921] [51519] (12) picpic
      SQ Q7SI98
      N-terminal domain; fused with a ricin A-like beta-trefoil domain
    6. Cellulomonas fimi [TaxId: 1708] [51520] (9) picpic
      synonym: beta-1,4-glycanase Cex
    7. Streptomyces halstedii [TaxId: 1944] [102070] (1) picpic
    8. Emericella nidulans (Aspergillus nidulans) [TaxId: 162425] [110350] (1) picpic
      SQ Q00177
  18. Xylanase 10c [102071]
    Endo-beta-1,4-xylanase
    1. Cellvibrio japonicus [TaxId: 155077] [102072] (2) picpic
  19. Glucosylceramidase, catalytic domain [89473]
    acid-beta-glucosidase; glycosyl hydrolase family 30; contains additional beta-domain similar to one found in alpha amylases
    1. Human (Homo sapiens) [TaxId: 9606] [89474] (27) picpic
  20. Glycosyl hydrolase family 5 xylanase, catalytic domain [102073]
    overall domain organization is similar to the homologous glucosylceramidase
    1. Erwinia chrysanthemi [TaxId: 556] [102074] (1) picpic
  21. Alpha-L-arabinofuranosidase, catalytic domain [102075]
    glycosyl hydrolase family 51
    1. Bacillus stearothermophilus [TaxId: 1422] [102076] (4) picpic
    2. Clostridium thermocellum [TaxId: 1515] [141779] (12) picpic
      SQ Q4CJG5 17-386
  22. Beta-D-xylosidase, catalytic domain [102077]
    glycosyl hydrolase family 39
    1. Thermoanaerobacterium saccharolyticum [TaxId: 28896] [102078] (2) picpic
    2. Bacillus stearothermophilus [TaxId: 1422] [141780] (24) picpic
      SQ Q9ZFM2 15-361
  23. endo-1,4-beta-mannosidase [141781]
    1. Blue mussel (Mytilus edulis) [TaxId: 6550] [141782] (1) picpic
      SQ Q8WPJ2 18-367
  24. Endoglucanase H N-terminal domain [141783]
    1. Clostridium thermocellum [TaxId: 1515] [141784] (4) picpic
      SQ P16218 29-304! SQ P16218 31-304
  25. Exochitosanase CsxA [159383]
    1. Amycolatopsis orientalis [TaxId: 31958] [159384] (2) picpic
      SQ Q56F26 336-674
  26. Five-domain beta-mannosidase, domain 3 [159385]
    1. Bacteroides thetaiotaomicron [TaxId: 818] [159386] (18) picpic
      SQ Q8AAK6 330-678! SQ Q8AAK6 331-678
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk