Structural Classification of Proteins

Superfamily: Glutaminase/Asparaginase

: uperfamily

Lineage:

Root: scop
Class: Alpha and beta proteins (a/b) [51349]
Mainly parallel beta sheets (beta-alpha-beta units)
Fold: Glutaminase/Asparaginase [53773]
consists of two non-similar alpha/beta domains, 3 layers (a/b/a) each
Domain 1 has mixed beta-sheet of 6 strands, order 213456, strand 6 is antiparallel to the rest; left-handed crossover connection between strands 4 and 5
Domain 2 has parallel beta-sheet of 4 strands, order 1234
Superfamily: Glutaminase/Asparaginase [53774]
uperfamily

Families:

Glutaminase/Asparaginase [53775] (8)
1. Asparaginase type II [53776]
  1. Escherichia coli [TaxId: 562] [53777] (7)
    1. 1nns
      complexed with asp
      1. chain a [85910]
      2. chain b [85911]
    2. 1jaz
      complexed with zn; mutant
      1. chain a [90883]
      2. chain b [90884]
    3. 4eca
      complexed with aei; mutant
      1. chain a [35550]
      2. chain b [35551]
      3. chain c [35552]
      4. chain d [35553]
    4. 3eca
      1. chain a [35554]
      2. chain b [35555]
      3. chain c [35556]
      4. chain d [35557]
    5. 1ho3
      complexed with asp; mutant
      1. chain a [61101]
      2. chain b [61102]
    6. 1jja
      mutant
      1. chain a [90891]
      2. chain b [90892]
      3. chain c [90893]
      4. chain d [90894]
      5. chain e [90895]
      6. chain f [90896]
    7. 1ihd
      mutant
      1. chain a [90665]
      2. chain c [90666]
  2. Wolinella succinogenes [TaxId: 844] [53778] (1)
    1. 1wsa
      1. chain a [35558]
      2. chain b [35559]
  3. Erwinia chrysanthemi [TaxId: 556] [53779] (8)
    1. 1o7j
      complexed with edo, gol, so4
      1. chain a [81140]
      2. chain b [81141]
      3. chain c [81142]
      4. chain d [81143]
    2. 1jsr
      complexed with 1pe, gol, ldo
      1. chain a [67237]
      2. chain b [67238]
      3. chain c [67239]
      4. chain d [67240]
    3. 1jsl
      complexed with 1pe, ddo, gol
      1. chain a [67233]
      2. chain b [67234]
      3. chain c [67235]
      4. chain d [67236]
    4. 1hfw
      complexed with glu
      1. chain a [61012]
      2. chain b [61013]
      3. chain c [61014]
      4. chain d [61015]
    5. 1hg1
      1. chain a [61020]
      2. chain b [61021]
      3. chain c [61022]
      4. chain d [61023]
    6. 1hg0
      complexed with sin
      1. chain a [61016]
      2. chain b [61017]
      3. chain c [61018]
      4. chain d [61019]
    7. 1hfk
      complexed with so4
      1. chain a [35560]
      2. chain c [35561]
    8. 1hfj
      complexed with so4
      1. chain a [35562]
      2. chain c [35563]
  4. Vibrio cholerae [TaxId: 666] [159797] (4)
    SQ Q9KQK3 2-337
    1. 2ocd
      complexed with act, gol
      1. region a:2-337 [148723]
    2. 2ocd
      automatically matched to 2OCD A:2-337
      complexed with act, gol
      1. region b:2-337 [148724]
    3. 2ocd
      automatically matched to 2OCD A:2-337
      complexed with act, gol
      1. region c:2-337 [148725]
    4. 2ocd
      automatically matched to 2OCD A:2-337
      complexed with act, gol
      1. region d:2-337 [148726]
2. Glutaminase-asparaginase [53780]
  1. Acinetobacter glutaminasificans [TaxId: 474] [53781] (1)
    1. 1agx
      1. chain a [35564]
  2. Pseudomonas sp., 7A [TaxId: 306] [53782] (4)
    1. 4pga
      complexed with nh4, so4
      1. chain a [35565]
      2. chain b [35566]
    2. 1djp
      1. chain a [35567]
      2. chain b [35568]
    3. 1djo
      1. chain a [35573]
      2. chain b [35574]
    4. 3pga
      1. chain 1 [35569]
      2. chain 2 [35570]
      3. chain 3 [35571]
      4. chain 4 [35572]
3. Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD [142776]
  1. Pyrococcus abyssi [TaxId: 29292] [142777] (2)
    SQ Q9V0T9 76-438
    1. 1zq1
      complexed with asp
      1. region a:76-438 [125490]
    2. 1zq1
      automatically matched to 1ZQ1 A:76-438
      complexed with asp
      1. region b:76-438 [125492]
  2. Methanobacterium thermoautotrophicum [TaxId: 145262] [142778] (2)
    SQ O26802 84-435
    1. 2d6f
      complexed with zn
      1. region a:84-435 [131304]
    2. 2d6f
      automatically matched to 2D6F A:84-435
      complexed with zn
      1. region b:86-435 [131306]