Structural Classification of Proteins
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Family: Glutaminase/Asparaginase

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Glutaminase/Asparaginase [53773]
    consists of two non-similar alpha/beta domains, 3 layers (a/b/a) each
    Domain 1 has mixed beta-sheet of 6 strands, order 213456, strand 6 is antiparallel to the rest; left-handed crossover connection between strands 4 and 5
    Domain 2 has parallel beta-sheet of 4 strands, order 1234
  4. Superfamily: Glutaminase/Asparaginase [53774]
    link to SUPERFAMILY database - Superfamily
  5. Family: Glutaminase/Asparaginase [53775]

Protein Domains:

  1. Asparaginase type II [53776]
    1. Escherichia coli [TaxId: 562] [53777] (7)
      1. 1nns picpic
        complexed with asp
        1. chain a [85910] picpiclink
        2. chain b [85911] picpiclink
      2. 1jaz picpic
        complexed with zn; mutant
        1. chain a [90883] picpiclink
        2. chain b [90884] picpiclink
      3. 4eca picpic
        complexed with aei; mutant
        1. chain a [35550] picpiclink
        2. chain b [35551] picpiclink
        3. chain c [35552] picpiclink
        4. chain d [35553] picpiclink
      4. 3eca picpic
        1. chain a [35554] picpiclink
        2. chain b [35555] picpiclink
        3. chain c [35556] picpiclink
        4. chain d [35557] picpiclink
      5. 1ho3 picpic
        complexed with asp; mutant
        1. chain a [61101] picpiclink
        2. chain b [61102] picpiclink
      6. 1jja picpic
        mutant
        1. chain a [90891] picpiclink
        2. chain b [90892] picpiclink
        3. chain c [90893] picpiclink
        4. chain d [90894] picpiclink
        5. chain e [90895] picpiclink
        6. chain f [90896] picpiclink
      7. 1ihd picpic
        mutant
        1. chain a [90665] picpiclink
        2. chain c [90666] picpiclink
    2. Wolinella succinogenes [TaxId: 844] [53778] (1)
      1. 1wsa picpic
        1. chain a [35558] picpiclink
        2. chain b [35559] picpiclink
    3. Erwinia chrysanthemi [TaxId: 556] [53779] (8)
      1. 1o7j picpic
        complexed with edo, gol, so4
        1. chain a [81140] picpiclink
        2. chain b [81141] picpiclink
        3. chain c [81142] picpiclink
        4. chain d [81143] picpiclink
      2. 1jsr picpic
        complexed with 1pe, gol, ldo
        1. chain a [67237] picpiclink
        2. chain b [67238] picpiclink
        3. chain c [67239] picpiclink
        4. chain d [67240] picpiclink
      3. 1jsl picpic
        complexed with 1pe, ddo, gol
        1. chain a [67233] picpiclink
        2. chain b [67234] picpiclink
        3. chain c [67235] picpiclink
        4. chain d [67236] picpiclink
      4. 1hfw picpic
        complexed with glu
        1. chain a [61012] picpiclink
        2. chain b [61013] picpiclink
        3. chain c [61014] picpiclink
        4. chain d [61015] picpiclink
      5. 1hg1 picpic
        1. chain a [61020] picpiclink
        2. chain b [61021] picpiclink
        3. chain c [61022] picpiclink
        4. chain d [61023] picpiclink
      6. 1hg0 picpic
        complexed with sin
        1. chain a [61016] picpiclink
        2. chain b [61017] picpiclink
        3. chain c [61018] picpiclink
        4. chain d [61019] picpiclink
      7. 1hfk picpic
        complexed with so4
        1. chain a [35560] picpiclink
        2. chain c [35561] picpiclink
      8. 1hfj picpic
        complexed with so4
        1. chain a [35562] picpiclink
        2. chain c [35563] picpiclink
    4. Vibrio cholerae [TaxId: 666] [159797] (4)
      SQ Q9KQK3 2-337
      1. 2ocd picpic
        complexed with act, gol
        1. region a:2-337 [148723] picpiclink
      2. 2ocd picpic
        automatically matched to 2OCD A:2-337
        complexed with act, gol
        1. region b:2-337 [148724] picpiclink
      3. 2ocd picpic
        automatically matched to 2OCD A:2-337
        complexed with act, gol
        1. region c:2-337 [148725] picpiclink
      4. 2ocd picpic
        automatically matched to 2OCD A:2-337
        complexed with act, gol
        1. region d:2-337 [148726] picpiclink
  2. Glutaminase-asparaginase [53780]
    1. Acinetobacter glutaminasificans [TaxId: 474] [53781] (1)
      1. 1agx picpic
        1. chain a [35564] picpiclink
    2. Pseudomonas sp., 7A [TaxId: 306] [53782] (4)
      1. 4pga picpic
        complexed with nh4, so4
        1. chain a [35565] picpiclink
        2. chain b [35566] picpiclink
      2. 1djp picpic
        1. chain a [35567] picpiclink
        2. chain b [35568] picpiclink
      3. 1djo picpic
        1. chain a [35573] picpiclink
        2. chain b [35574] picpiclink
      4. 3pga picpic
        1. chain 1 [35569] picpiclink
        2. chain 2 [35570] picpiclink
        3. chain 3 [35571] picpiclink
        4. chain 4 [35572] picpiclink
  3. Glutamyl-tRNA(Gln) amidotransferase subunit D, GatD [142776]
    1. Pyrococcus abyssi [TaxId: 29292] [142777] (2)
      SQ Q9V0T9 76-438
      1. 1zq1 picpicxrefxrefxrefxrefxrefxrefxrefxref
        complexed with asp
        1. region a:76-438 [125490] picpiclink
      2. 1zq1 picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 1ZQ1 A:76-438
        complexed with asp
        1. region b:76-438 [125492] picpiclink
    2. Methanobacterium thermoautotrophicum [TaxId: 145262] [142778] (2)
      SQ O26802 84-435
      1. 2d6f picpicxrefxrefxrefxrefxrefxrefxrefxref
        complexed with zn
        1. region a:84-435 [131304] picpiclink
      2. 2d6f picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to 2D6F A:84-435
        complexed with zn
        1. region b:86-435 [131306] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk