Structural Classification of Proteins
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Protein: Nitrogenase iron-molybdenum protein, beta chain from Azotobacter vinelandii [TaxId: 354]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Chelatase-like [53799]
    duplication: tandem repeat of two domains; 3 layers (a/b/a); parallel beta-sheet of 4 strands, order 2134
  4. Superfamily: "Helical backbone" metal receptor [53807]
    contains a long alpha helical insertion in the interdomain linker
    link to SUPERFAMILY database - Superfamily
  5. Family: Nitrogenase iron-molybdenum protein [53816]
    contains three domains of this fold; "Helical backbone" holds domains 2 and 3
    both chains are homologous; the inter-chain arrangement of domains 1 is similar to the intra-chain arrangement of domains 2 and 3
  6. Protein: Nitrogenase iron-molybdenum protein, beta chain [81401]
    both chains are homologous; the inter-chain arrangement of domains 1 is similar to the intra-chain arrangement of domains 2 and 3
  7. Species: Azotobacter vinelandii [TaxId: 354] [81397]

PDB Entry Domains:

  1. 1m1n picpicxref
    complexed with ca, cfn, clf, hca
    1. chain b [78418] picpiclink
    2. chain d [78420] picpiclink
    3. chain f [78422] picpiclink
    4. chain h [78424] picpiclink
  2. 2afh picpicxrefxrefxrefxref
    automatically matched to d1fp4b_
    complexed with 1pe, ca, cfn, clf, hca, na, p6g, peg, pg4, pge, sf4, trs
    1. region b:2-523 [126680] picpiclink
  3. 2afh picpicxrefxrefxrefxref
    automatically matched to d1fp4b_
    complexed with 1pe, ca, cfn, clf, hca, na, p6g, peg, pg4, pge, sf4, trs
    1. region d:2-523 [126682] picpiclink
  4. 2min picpicxref
    complexed with ca, cfm, clf, hca
    1. chain b [35610] picpiclink
    2. chain d [35612] picpiclink
  5. 3min picpicxref
    complexed with ca, cfm, clf, hca
    1. chain b [35606] picpiclink
    2. chain d [35608] picpiclink
  6. 1m34 picpicxrefxref
    complexed with adp, alf, ca, cfm, clf, fs4, hca, mg
    1. chain b [78516] picpiclink
    2. chain d [78518] picpiclink
    3. chain j [78524] picpiclink
    4. chain l [78526] picpiclink
  7. 2afk picpicxrefxref
    automatically matched to d1fp4b_
    complexed with acp, ca, cfn, clf, hca, mg, sf4
    1. region b:2-523 [126695] picpiclink
  8. 2afk picpicxrefxref
    automatically matched to d1fp4b_
    complexed with acp, ca, cfn, clf, hca, mg, sf4
    1. region d:2-523 [126697] picpiclink
  9. 1g20 picpicxrefxref
    complexed with ca, cfm, clf, fs4, hca
    1. chain b [35614] picpiclink
    2. chain d [35616] picpiclink
  10. 1fp4 picpicxref
    complexed with ca, cfm, clp, hca; mutant
    1. chain b [76188] picpiclink
    2. chain d [76190] picpiclink
  11. 1l5h picpicxref
    FeMo-cofactor deficient
    complexed with ca, clf
    1. chain b [73591] picpiclink
  12. 1n2c picpicxrefxref
    complexed with adp, alf, ca, cfm, clf, fs4, hca, mg
    1. chain b [35618] picpiclink
    2. chain d [35620] picpiclink
  13. 2afi picpicxrefxrefxrefxref
    automatically matched to d1fp4b_
    complexed with adp, ca, cfn, clf, hca, mg, sf4
    1. region b:2-523 [126686] picpiclink
  14. 2afi picpicxrefxrefxrefxref
    automatically matched to d1fp4b_
    complexed with adp, ca, cfn, clf, hca, mg, sf4
    1. region d:2-523 [126688] picpiclink
  15. 2afi picpicxrefxrefxrefxref
    automatically matched to d1fp4b_
    complexed with adp, ca, cfn, clf, hca, mg, sf4
    1. region j:2-523 [126690] picpiclink
  16. 2afi picpicxrefxrefxrefxref
    automatically matched to d1fp4b_
    complexed with adp, ca, cfn, clf, hca, mg, sf4
    1. region l:2-523 [126692] picpiclink
  17. 1g21 picpicxrefxref
    complexed with atp, ca, cfm, clf, fs4, hca, mg
    1. chain b [35622] picpiclink
    2. chain d [35624] picpiclink
  18. 1m1y picpicxrefxref
    chemically crosslinked structure
    complexed with ca, cfm, clf, fs4, hca
    1. chain b [78442] picpiclink
    2. chain d [78444] picpiclink
    3. chain j [78450] picpiclink
    4. chain l [78452] picpiclink

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site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
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