Structural Classification of Proteins
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Superfamily: Periplasmic binding protein-like I

Similar in architecture to the superfamily II but partly differs in topology
link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Periplasmic binding protein-like I [53821]
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    parallel beta-sheet of 6 strands, order 213456
  4. Superfamily: Periplasmic binding protein-like I [53822]
    Similar in architecture to the superfamily II but partly differs in topology
    link to SUPERFAMILY database - Superfamily

Families:

  1. L-arabinose binding protein-like [53823] (18)
    1. D-ribose-binding protein [53824]
      1. Escherichia coli, strain k-12 [TaxId: 562] [53825] (6) picpic
    2. L-arabinose-binding protein [53826]
      1. Escherichia coli [TaxId: 562] [53827] (9) picpic
    3. D-allose-binding protein [53828]
      1. Escherichia coli [TaxId: 562] [53829] (3) picpic
    4. Galactose/glucose-binding protein [53830]
      1. Escherichia coli [TaxId: 562] [53831] (6) picpic
      2. Salmonella typhimurium, strain lt2 [TaxId: 90371] [53832] (3) picpic
    5. Amide receptor/negative regulator of the amidase operon (AmiC) [53833]
      1. Pseudomonas aeruginosa [TaxId: 287] [53834] (3) picpic
    6. Quorum-sensing signal (autoinducer-2) binding protein LuxP [69622]
      1. Vibrio harveyi [TaxId: 669] [69623] (4) picpic
    7. Purine repressor (PurR), C-terminal domain [53835]
      1. Escherichia coli [TaxId: 562] [53836] (24) picpic
    8. Lac-repressor (lacR) core (C-terminal domain) [53837]
      1. Escherichia coli [TaxId: 562] [53838] (16) picpic
    9. Trehalose repressor, C-terminal domain [53839]
      1. Escherichia coli [TaxId: 562] [53840] (1) picpic
    10. Leucine-,isoleucine-,valine-binding (LIV) protein [53841]
      1. Escherichia coli [TaxId: 562] [53842] (1) picpic
    11. Leucine-binding protein [53843]
      1. Escherichia coli [TaxId: 562] [53844] (4) picpic
    12. Hormone binding domain of the atrial natriuretic peptide receptor [53845]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [53846] (2) picpic
        SQ P18910 29-454
      2. Human (Homo sapiens) [TaxId: 9606] [64190] (2) picpic
    13. Metabotropic glutamate receptor subtype 1 [53847]
      1. Rat (Rattus norvegicus) [TaxId: 10116] [53848] (5) picpic
    14. AI-2 receptor LsrB [110745]
      1. Salmonella typhi [TaxId: 90370] [110746] (2) picpic
        SQ Q8Z2X8 27-340
    15. Glucose-resistance amylase regulator CcpA, C-terminal domain [117740]
      1. Bacillus megaterium [TaxId: 1404] [117741] (11) picpic
        SQ P46828 58-322 ! SQ P46828
    16. YraM C-terminal domain [159804]
      1. Haemophilus influenzae [TaxId: 727] [159805] (1) picpic
        SQ P45299 257-573
        HI1655
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk