Structural Classification of Proteins
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Protein: Nickel-binding periplasmic protein NikA from Escherichia coli [TaxId: 562]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Periplasmic binding protein-like II [53849]
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. Superfamily: Periplasmic binding protein-like II [53850]
    Similar in architecture to the superfamily I but partly differs in topology
    link to SUPERFAMILY database - Superfamily
  5. Family: Phosphate binding protein-like [53851]
  6. Protein: Nickel-binding periplasmic protein NikA [102694]
    similar domain organization to oligo- and dipeptide-binding protein
  7. Species: Escherichia coli [TaxId: 562] [102695]

PDB Entry Domains:

  1. 1zlq picpic
    complexed with act, cl, dtt, edt, fe, gol, so4
    1. region a:3-501 [125253] picpiclink
  2. 1zlq picpic
    automatically matched to 1ZLQ A:3-501
    complexed with act, cl, dtt, edt, fe, gol, so4
    1. region b:3-500 [125254] picpiclink
  3. 1uiv picpic
    complexed with ni; mutant
    1. chain a [99436] picpiclink
    2. chain b [99437] picpiclink
  4. 1uiu picpic
    mutant
    1. chain a [99434] picpiclink
    2. chain b [99435] picpiclink
  5. 3dp8 picpic
    automatically matched to d1zlqa1
    complexed with act, cl, gol, hct, ni, so4
    1. region a:3-499 [157821] picpiclink
  6. 3dp8 picpic
    automatically matched to d1zlqa1
    complexed with act, cl, gol, hct, ni, so4
    1. region b:3-499 [157822] picpiclink
  7. 3dp8 picpic
    automatically matched to d1zlqa1
    complexed with act, cl, gol, hct, ni, so4
    1. region c:4-499 [157823] picpiclink
  8. 3e3k picpic
    automatically matched to d1zlqa1
    complexed with act, cl, gol, hct, so4
    1. region a:3-499 [157991] picpiclink
  9. 3e3k picpic
    automatically matched to d1zlqa1
    complexed with act, cl, gol, hct, so4
    1. region b:3-499 [157992] picpiclink
  10. 3e3k picpic
    automatically matched to d1zlqa1
    complexed with act, cl, gol, hct, so4
    1. region c:3-499 [157993] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk