Structural Classification of Proteins
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Protein: N-methyl-D-aspartate receptor subunit 1 from Rat (Rattus norvegicus) [TaxId: 10116]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Periplasmic binding protein-like II [53849]
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. Superfamily: Periplasmic binding protein-like II [53850]
    Similar in architecture to the superfamily I but partly differs in topology
    link to SUPERFAMILY database - Superfamily
  5. Family: Phosphate binding protein-like [53851]
  6. Protein: N-methyl-D-aspartate receptor subunit 1 [89787]
  7. Species: Rat (Rattus norvegicus) [TaxId: 10116] [89788]

PDB Entry Domains:

  1. 1pb7 picpic
    complexed with gly
    1. chain a [88025] picpiclink
  2. 1y20 picpic
    automatically matched to d1pb7a_
    complexed with 1ac
    1. region a:5-285 [122553] picpiclink
  3. 1pb8 picpic
    complexed with dsn
    1. chain a [88026] picpiclink
  4. 1y1z picpic
    automatically matched to d1pb7a_
    complexed with 192
    1. region a:5-285 [122552] picpiclink
  5. 1pb9 picpic
    complexed with 4ax
    1. chain a [88027] picpiclink
  6. 1y1m picpic
    automatically matched to d1pb7a_
    complexed with ac5
    1. region a:5-285 [122548] picpiclink
  7. 1y1m picpic
    automatically matched to d1pb7a_
    complexed with ac5
    1. region b:5-285 [122549] picpiclink
  8. 1pbq picpic
    complexed with dk1
    1. chain a [88028] picpiclink
    2. chain b [88029] picpiclink
  9. 2a5t picpicxref
    automatically matched to d1pb7a_
    complexed with glu, gly
    1. region a:5-285 [126179] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk