Structural Classification of Proteins
home mail help root up expand collapse

Protein: Porphobilinogen deaminase (hydroxymethylbilane synthase), N-terminal domain from Escherichia coli [TaxId: 562]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Periplasmic binding protein-like II [53849]
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. Superfamily: Periplasmic binding protein-like II [53850]
    Similar in architecture to the superfamily I but partly differs in topology
    link to SUPERFAMILY database - Superfamily
  5. Family: Phosphate binding protein-like [53851]
  6. Protein: Porphobilinogen deaminase (hydroxymethylbilane synthase), N-terminal domain [53854]
  7. Species: Escherichia coli [TaxId: 562] [53855]

PDB Entry Domains:

  1. 1pda picpicxref
    complexed with acy, dpm
    1. region a:3-219 [35751] picpiclink
  2. 1gtk picpicxref
    complexed with dpm
    1. region a:3-219 [76346] picpiclink
  3. 1ah5 picpicxref
    complexed with dpm
    1. region a:3-219 [35752] picpiclink
  4. 2ypn picpicxref
    complexed with dpm
    1. region a:3-219 [35753] picpiclink
  5. 1ypn picpicxref
    complexed with dpm; mutant
    1. region a:3-219 [35754] picpiclink
Enter search key:
MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk