Structural Classification of Proteins
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Protein: Ovotransferrin from Duck (Anas platyrhynchos) [TaxId: 8839]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Periplasmic binding protein-like II [53849]
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. Superfamily: Periplasmic binding protein-like II [53850]
    Similar in architecture to the superfamily I but partly differs in topology
    link to SUPERFAMILY database - Superfamily
  5. Family: Transferrin [53888]
    further duplication: composed of two two-domain lobes
  6. Protein: Ovotransferrin [53894]
  7. Species: Duck (Anas platyrhynchos) [TaxId: 8839] [53895]

PDB Entry Domains:

  1. 1gv8 picpic
    domain II in the N-terminal lobe
    complexed with co3, fe, gly
    1. chain a [65606] picpiclink
  2. 1gvc picpic
    domain II in the N-terminal lobe
    complexed with co3, fe, nta
    1. chain a [65607] picpiclink
  3. 1ovb picpic
    domain II in the N-terminal lobe
    complexed with co3, fe
    1. chain a [35875] picpiclink
  4. 1dot picpic
    complexed with co3, fe, fuc, nag
    1. region a:1-334 [35876] picpiclink
    2. region a:335-686 [35877] picpiclink
  5. 1aov picpic
    1. region a:1-334 [35878] picpiclink
    2. region a:335-686 [35879] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk