Structural Classification of Proteins
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Family: Deoxycytidylate deaminase-like

strand 5 is parallel to strand 4

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Cytidine deaminase-like [53926]
    core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest
  4. Superfamily: Cytidine deaminase-like [53927]
    contains extra C-terminal strand 5, order 21345
    link to SUPERFAMILY database - Superfamily
  5. Family: Deoxycytidylate deaminase-like [89800]
    strand 5 is parallel to strand 4

Protein Domains:

  1. Cytosine deaminase [89801]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [89802] (8) picpic
  2. Guanine deaminase GuaD [110765]
    1. Bacillus subtilis [TaxId: 1423] [110766] (2) picpic
      SQ O34598
  3. Deoxycytidylate deaminase [117756]
    1. Bacteriophage T4 [TaxId: 10665] [117757] (1) picpic
      SQ P16006
  4. Putative deaminase NE0047 [142833]
    1. Nitrosomonas europaea [TaxId: 915] [142834] (1) picpic
      SQ Q82Y41 1-189
  5. Cytidine and deoxycytidylate deaminase CodA [142835]
    1. Agrobacterium tumefaciens [TaxId: 358] [142836] (2) picpic
      SQ Q8UHJ4 2-131
  6. Riboflavin biosynthesis protein RibD [142837]
    1. Bacillus subtilis [TaxId: 1423] [142838] (8) picpic
      SQ P17618 1-145
    2. Thermotoga maritima [TaxId: 2336] [142839] (1) picpic
      SQ Q9X2E8 1-147
  7. tRNA adenosine deaminase TadA [142840]
    1. Staphylococcus aureus [TaxId: 1280] [142841] (4) picpic
      SQ Q99W51 1-151
    2. Escherichia coli [TaxId: 562] [142842] (2) picpic
      SQ P68398 13-168
    3. Aquifex aeolicus [TaxId: 63363] [142843] (4) picpic
      SQ O67050 1-151

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site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk