Structural Classification of Proteins
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Protein: GDP-mannose-3', 5'-epimerase from Thale cress (Arabidopsis thaliana) [TaxId: 3702]

SQ Q93VR3 13-374! SQ Q93VR3 13-375

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: NAD(P)-binding Rossmann-fold domains [51734]
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. Superfamily: NAD(P)-binding Rossmann-fold domains [51735]
    link to SUPERFAMILY database - Superfamily
  5. Family: Tyrosine-dependent oxidoreductases [51751]
    also known as short-chain dehydrogenases and SDR family
    parallel beta-sheet is extended by 7th strand, order 3214567; left-handed crossover connection between strands 6 and 7
  6. Protein: GDP-mannose-3', 5'-epimerase [141890]
  7. Species: Thale cress (Arabidopsis thaliana) [TaxId: 3702] [141891]
    SQ Q93VR3 13-374! SQ Q93VR3 13-375

PDB Entry Domains:

  1. 2c5a picpic
    complexed with btb, fmt, gdc, nad; mutant
    1. region a:13-375 [129894] picpiclink
  2. 2c5a picpic
    automatically matched to 2C5A A:13-375
    complexed with btb, fmt, gdc, nad; mutant
    1. region b:13-372 [129895] picpiclink
  3. 2c54 picpic
    complexed with epe, fmt, gkd, gke, nad; mutant
    1. region a:13-374 [129877] picpiclink
  4. 2c54 picpic
    automatically matched to 2C54 A:13-374
    complexed with epe, fmt, gkd, gke, nad; mutant
    1. region b:13-371 [129878] picpiclink
  5. 2c5e picpic
    complexed with fmt, gdd, nad; mutant
    1. region a:13-375 [129912] picpiclink
  6. 2c5e picpic
    automatically matched to 2C5E A:13-375
    complexed with fmt, gdd, nad; mutant
    1. region b:13-372 [129913] picpiclink
  7. 2c59 picpic
    complexed with btb, fmt, gdc, gdd, nad
    1. region a:13-375 [129892] picpiclink
  8. 2c59 picpic
    automatically matched to 2C59 A:13-375
    complexed with btb, fmt, gdc, gdd, nad
    1. region b:13-371 [129893] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk