Structural Classification of Proteins
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Protein: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) from Archaeon Methanothermus fervidus [TaxId: 2180]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: NAD(P)-binding Rossmann-fold domains [51734]
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. Superfamily: NAD(P)-binding Rossmann-fold domains [51735]
    link to SUPERFAMILY database - Superfamily
  5. Family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain [51800]
    family members also share a common alpha+beta fold in C-terminal domain
  6. Protein: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) [51801]
  7. Species: Archaeon Methanothermus fervidus [TaxId: 2180] [51807]

PDB Entry Domains:

  1. 1cf2 picpicxref
    complexed with nap, so4
    1. region o:1-138,o:304-336 [29994] picpiclink
    2. region q:1-138,q:304-336 [29995] picpiclink
    3. region p:1-138,p:304-336 [29996] picpiclink
    4. region r:1-138,r:304-336 [29997] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk