Structural Classification of Proteins
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Family: LDH N-terminal domain-like

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: NAD(P)-binding Rossmann-fold domains [51734]
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. Superfamily: NAD(P)-binding Rossmann-fold domains [51735]
    link to SUPERFAMILY database - Superfamily
  5. Family: LDH N-terminal domain-like [51848]

Protein Domains:

  1. Malate dehydrogenase [51849]
    1. Pig (Sus scrofa) [TaxId: 9823] [51850] (3) picpic
    2. Sorghum (Sorghum vulgare), chloroplast [TaxId: 4558] [51851] (1) picpic
    3. Flaveria bidentis, chloroplast [TaxId: 4224] [51852] (1) picpic
    4. Escherichia coli [TaxId: 562] [51853] (8) picpic
    5. Thermus flavus [TaxId: 274] [51854] (2) picpic
    6. Thermus thermophilus [TaxId: 274] [82300] (9) picpic
      identical sequence to that from the Thermus flavus enzyme
    7. Archaeon Haloarcula marismortui [TaxId: 2238] [51855] (17) picpic
    8. Aquaspirillum arcticum [TaxId: 87645] [51856] (3) picpic
    9. Chloroflexus aurantiacus [TaxId: 1108] [69415] (7) picpic
      SQ P80040
    10. Chlorobium tepidum [TaxId: 1097] [69416] (1) picpic
    11. Chlorobium vibrioforme [TaxId: 1098] [69417] (2) picpic
    12. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [110427] (2) picpic
      SQ O08349
  2. L-2-hydroxyisocapronate dehydrogenase, L-HICDH [51857]
    1. Lactobacillus confusus [TaxId: 1583] [51858] (1) picpic
  3. Lactate dehydrogenase [51859]
    1. Pig (Sus scrofa) [TaxId: 9823] [51860] (3) picpic
    2. Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606] [63939] (2) picpic
    3. Human (Homo sapiens), muscle isoform (M chain) [TaxId: 9606] [63940] (1) picpic
    4. Mouse (Mus musculus) [TaxId: 10090] [51861] (4) picpic
    5. Dogfish (Squalus acanthias) [TaxId: 7797] [51862] (3) picpic
    6. Malaria parasite (Plasmodium falciparum) [TaxId: 5833] [51863] (9) picpic
    7. Plasmodium berghei [TaxId: 5821] [102165] (7) picpic
    8. Toxoplasma gondii [TaxId: 5811] [102166] (4) picpic
    9. Bacillus stearothermophilus [TaxId: 1422] [51864] (9) picpic
    10. Lactobacillus casei [TaxId: 1582] [51865] (1) picpic
    11. Lactobacillus pentosus [TaxId: 1589] [69418] (1) picpic
    12. Bifidobacterium longum, strain am101-2 [TaxId: 216816] [51866] (2) picpic
    13. Thermotoga maritima [TaxId: 2336] [51867] (1) picpic
    14. Clostridium thermocellum [TaxId: 1515] [117432] (1) picpic
      SQ Q4CDK5
  4. MJ0490, lactate/malate dehydrogenase [63941]
    1. Archaeon Methanococcus jannaschii [TaxId: 2190] [63942] (2) picpic
  5. Alpha-glucosidase AglA [89530]
    1. Thermotoga maritima [TaxId: 2336] [89531] (1) picpic
      TM1834
  6. Putative alpha-glucosidase TM0752 [102167]
    1. Thermotoga maritima [TaxId: 2336] [102168] (1) picpic
  7. Maltose-6'-phosphate glucosidase GlvA [102169]
    1. Bacillus subtilis [TaxId: 1423] [102170] (1) picpic
      SQ P54716
  8. 6-phospho-beta-glucosidase [110428]
    1. Bacillus stearothermophilus [TaxId: 1422] [110429] (1) picpic
      SQ P84135
    2. Thermotoga maritima [TaxId: 2336] [110430] (3) picpic
      SQ Q9X108
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk