Structural Classification of Proteins
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Protein: Glycerol-3- phosphate dehydrogenase from Trypanosome (Leishmania mexicana) [TaxId: 5665]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: NAD(P)-binding Rossmann-fold domains [51734]
    core: 3 layers, a/b/a; parallel beta-sheet of 6 strands, order 321456
    The nucleotide-binding modes of this and the next two folds/superfamilies are similar
  4. Superfamily: NAD(P)-binding Rossmann-fold domains [51735]
    link to SUPERFAMILY database - Superfamily
  5. Family: 6-phosphogluconate dehydrogenase-like, N-terminal domain [51868]
    the beta-sheet is extended to 8 strands, order 32145678; strands 7 & 8 are antiparallel to the rest
    C-terminal domains also show some similarity
  6. Protein: Glycerol-3- phosphate dehydrogenase [51881]
  7. Species: Trypanosome (Leishmania mexicana) [TaxId: 5665] [51882]

PDB Entry Domains:

  1. 1n1e picpicxref
    complexed with nde
    1. region a:9-197 [85257] picpiclink
    2. region b:9-197 [85259] picpiclink
  2. 1m66 picpicxref
    complexed with bcp, plm
    1. region a:9-197 [78690] picpiclink
  3. 1evy picpicxref
    complexed with mys
    1. region a:9-197 [30215] picpiclink
  4. 1jdj picpicxref
    complexed with cfp, mys
    1. region a:9-197 [71636] picpiclink
  5. 1evz picpicxref
    complexed with mys, nah
    1. region a:9-197 [30216] picpiclink
  6. 1n1g picpicxref
    complexed with bcp, plm
    1. region a:9-197 [91543] picpiclink
  7. 1m67 picpicxref
    complexed with boa, plm
    1. region a:9-197 [78692] picpiclink

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MRC
site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk