Structural Classification of Proteins

Fold: Flavodoxin-like

: 3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345

Lineage:

Root: scop
Class: Alpha and beta proteins (a/b) [51349]
Mainly parallel beta sheets (beta-alpha-beta units)
Fold: Flavodoxin-like [52171]
3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345

Superfamilies:

CheY-like [52172] (7)
uperfamily
1. CheY-related [52173] (32)
  1. CheY protein [52174]
    1. Escherichia coli [TaxId: 562] [52175] (35)
      SQ P06143
      1. 1jbe
        meta-active conformation
        complexed with acy, gol, snn, so4
        
        chain a [62845]
      2. 3chy
        complexed with so4
        
        chain a [31038]
      3. 1u8t
        complexed with so4; mutant
        
        chain a [113192]
        chain b [113193]
        chain c [113194]
        chain d [113195]
      4. 1chn
        complexed with mg
        
        chain a [31040]
      5. 1e6m
        mutant
        
        chain a [31039]
      6. 1ymv
        complexed with mg; mutant
        
        chain a [31045]
      7. 1udr
        mutant
        
        chain a [31041]
        chain b [31042]
        chain c [31043]
        chain d [31044]
      8. 1d4z
        complexed with so4; mutant
        
        chain a [31047]
      9. 1e6l
        mutant
        
        chain a [59307]
      10. 1vlz
        mutant
        
        chain a [31048]
        chain b [31049]
      11. 1c4w
        thiophosphonate modified
        mutant
        
        chain a [31046]
      12. 1ffg
        complexed with mn
        
        chain a [31051]
        chain c [31052]
      13. 1e6k
        mutant
        
        chain a [59306]
      14. 5chy
        complexed with ca; mutant
        
        chain a [31050]
      15. 1f4v
        bound to the N-terminus of FliM
        complexed with bef, gol, mg
        
        chain a [31058]
        chain b [31059]
        chain c [31060]
      16. 1ab6
        mutant
        
        chain a [31054]
        chain b [31055]
      17. 2b1j
        automatically matched to 1ZDM A:2-129
        complexed with mg
        
        region a:2-129 [127670]
      18. 2b1j
        automatically matched to 1ZDM A:2-129
        complexed with mg
        
        region b:2-129 [127671]
      19. 1ab5
        mutant
        
        chain a [31056]
        chain b [31057]
      20. 1fqw
        complexed with bef, mn
        
        chain a [59992]
        chain b [59993]
      21. 1zdm
        complexed with bfd, mn, xe
        
        region a:2-129 [124941]
      22. 1zdm
        automatically matched to 1ZDM A:2-129
        complexed with bfd, mn, xe
        
        region b:2-129 [124942]
      23. 1hey
        mutant
        
        chain a [31061]
      24. 1ffs
        complexed with mn
        
        chain a [31068]
        chain c [31069]
      25. 6chy
        complexed with so4; mutant
        
        chain a [31062]
        chain b [31063]
      26. 1ymu
        mutant
        
        chain a [31066]
        chain b [31067]
      27. 1eay
        
        chain a [31064]
        chain b [31065]
      28. 1bdj
        complexed with so4
        
        chain a [31070]
      29. 1mih
        complexed with bef, mn, so4; mutant
        
        chain a [84975]
        chain b [84976]
      30. 1ffw
        complexed with mn, pon
        
        chain a [31075]
        chain c [31076]
      31. 1a0o
        complexed with mn
        
        chain a [31071]
        chain c [31072]
        chain e [31073]
        chain g [31074]
      32. 1kmi
        complexed with CheZ
        complexed with bcn, bef, mg; mutant
        
        chain y [72751]
      33. 1cye
        mutant
        
        chain a [31077]
      34. 1djm
        BeF3-activated
        
        chain a [31078]
      35. 1ehc
        naturally-occurring mutant
        
        chain a [31053]
    2. Salmonella typhimurium [TaxId: 90371] [52176] (18)
      1. 2fka
        automatically matched to d2che__
        complexed with bef, cxs, mg, so4
        
        region a:2-129 [133649]
      2. 2flw
        automatically matched to d2che__
        complexed with bef, mg, so4
        
        region a:2-129 [133751]
      3. 2fmf
        automatically matched to d2che__
        complexed with so4
        
        region a:2-129 [133773]
      4. 2flk
        automatically matched to d2che__
        complexed with cxs, so4
        
        region a:2-129 [133726]
      5. 2fmk
        automatically matched to d2che__
        complexed with ace, bef, mg
        
        region a:2-129 [133777]
      6. 2chf
        
        chain a [31079]
      7. 2fmh
        automatically matched to d2che__
        complexed with bef, gol, mg, so4, trs
        
        region a:2-129 [133775]
      8. 2fmi
        automatically matched to d2che__
        complexed with gol, so4, trs
        
        region a:2-129 [133776]
      9. 2che
        complexed with mg
        
        chain a [31080]
      10. 2pl9
        automatically matched to d2chea_
        complexed with bef, mes, mg
        
        region a:2-129 [149622]
      11. 2pl9
        automatically matched to d2chea_
        complexed with bef, mes, mg
        
        region b:2-129 [149623]
      12. 2pl9
        automatically matched to d2chea_
        complexed with bef, mes, mg
        
        region c:2-129 [149624]
      13. 2pmc
        automatically matched to d2chea_
        complexed with mg
        
        region a:2-129 [149659]
      14. 2pmc
        automatically matched to d2chea_
        complexed with mg
        
        region b:2-129 [149660]
      15. 2pmc
        automatically matched to d2chea_
        complexed with mg
        
        region c:2-129 [149661]
      16. 2pmc
        automatically matched to d2chea_
        complexed with mg
        
        region d:2-129 [149662]
      17. 1cey
        
        chain a [31082]
      18. 2chy
        CA-atoms only, mutant protein sequence
        
        chain a [31081]
    3. Thermotoga maritima [TaxId: 2336] [52177] (5)
      SQ Q56312
      1. 1u0s
        
        chain y [107566]
      2. 1tmy
        
        chain a [31083]
      3. 3tmy
        complexed with mn
        
        chain a [31084]
        chain b [31085]
      4. 2tmy
        
        chain a [31086]
      5. 4tmy
        complexed with mg
        
        chain a [31087]
        chain b [31088]
    4. Sinorhizobium meliloti, CheY2 [TaxId: 382] [102225] (2)
      SQ Q52884
      1. 1p6q
        
        chain a [104074]
      2. 1p6u
        
        chain a [94190]
  2. Nitrate/nitrite response regulator (NarL), receiver domain [52178]
    1. Escherichia coli [TaxId: 562] [52179] (2)
      1. 1a04
        
        region a:5-142 [31089]
        region b:5-142 [31090]
      2. 1rnl
        complexed with gol, pt
        
        region a:5-142 [31091]
  3. NTRC receiver domain [52180]
    1. Salmonella typhimurium [TaxId: 90371] [52181] (6)
      1. 1krw
        
        chain a [91024]
      2. 1krx
        complexed with bef
        
        chain a [91025]
      3. 1j56
        complexed with bef
        
        chain a [90881]
      4. 1ntr
        
        chain a [31092]
      5. 1dc7
        
        chain a [31093]
      6. 1dc8
        
        chain a [31094]
  4. Transcriptional regulatory protein FixJ, receiver domain [52182]
    1. Rhizobium meliloti [TaxId: 382] [52183] (4)
      1. 1dbw
        
        chain a [31095]
        chain b [31096]
      2. 1dck
        
        chain a [31097]
        chain b [31098]
      3. 1d5w
        phosphorylated form
        complexed with pas, so4; mutant
        
        chain a [31099]
        chain b [31100]
        chain c [31101]
      4. 1dcm
        complexed with mg; mutant
        
        chain a [31102]
        chain b [31103]
  5. Transcriptional regulatory protein DctD, receiver domain [52184]
    1. Sinorhizobium meliloti [TaxId: 382] [52185] (3)
      1. 1qkk
        also includes a part of the linker region
        
        chain a [31104]
      2. 1l5y
        also includes a part of the linker region
        complexed with bef, bf2, bf4, cry, mg, so4; mutant
        
        chain a [77720]
        chain b [77721]
      3. 1l5z
        also includes a part of the linker region
        complexed with cry, so4; mutant
        
        chain a [77722]
  6. Sporulation response regulator Spo0A [52186]
    1. Bacillus stearothermophilus [TaxId: 1422] [52187] (2)
      1. 1dz3
        C-terminal helix-swapping dimer
        complexed with so4
        
        chain a [31105]
      2. 1qmp
        
        chain a [31106]
        chain b [31107]
        chain c [31108]
        chain d [31109]
  7. Sporulation response regulator Spo0F [52188]
    1. Bacillus subtilis [TaxId: 1423] [52189] (11)
      SQ P06628
      1. 1pey
        complexed with mn; mutant
        
        chain a [104137]
        chain b [104138]
        chain c [104139]
      2. 1nat
        
        chain a [31113]
      3. 2ftk
        automatically matched to d1srrc_
        complexed with bfd, mg; mutant
        
        region e:1203-1321 [134069]
      4. 2ftk
        automatically matched to d1srrc_
        complexed with bfd, mg; mutant
        
        region f:1003-1121 [134070]
      5. 2ftk
        automatically matched to d1srrc_
        complexed with bfd, mg; mutant
        
        region g:1603-1721 [134071]
      6. 2ftk
        automatically matched to d1srrc_
        complexed with bfd, mg; mutant
        
        region h:1403-1521 [134072]
      7. 1f51
        complexed with mg
        
        chain e [31114]
        chain f [31115]
        chain g [31116]
        chain h [31117]
      8. 1fsp
        
        chain a [31118]
      9. 2fsp
        
        chain a [31119]
      10. 1pux
        
        chain a [95140]
      11. 1srr
        phosphatase resistant mutant
        
        chain a [31110]
        chain b [31111]
        chain c [31112]
  8. Methylesterase CheB, N-terminal domain [52190]
    1. Salmonella typhimurium [TaxId: 90371] [52191] (1)
      1. 1a2o
        
        region a:1-140 [31120]
        region b:1-140 [31121]
  9. PhoB receiver domain [52192]
    1. Thermotoga maritima [TaxId: 2336] [69445] (1)
      1. 1kgs
        complexed with scn
        
        region a:2-123 [68597]
    2. Escherichia coli [TaxId: 562] [52193] (7)
      1. 1zes
        automatically matched to d1b00a_
        complexed with bef, mg; mutant
        
        region a:3-123 [124994]
      2. 1zes
        automatically matched to d1b00a_
        complexed with bef, mg; mutant
        
        region b:3-122 [124995]
      3. 1zes
        automatically matched to d1b00a_
        complexed with bef, mg; mutant
        
        region c:3-122 [124996]
      4. 1b00
        
        chain a [31122]
        chain b [31123]
      5. 2iyn
        automatically matched to d1b00a_
        complexed with mg
        
        region a:3-121 [137803]
      6. 2iyn
        automatically matched to d1b00a_
        complexed with mg
        
        region b:3-121 [137804]
      7. 2iyn
        automatically matched to d1b00a_
        complexed with mg
        
        region c:3-121 [137805]
  10. PhoP receiver domain [82340]
    1. Bacillus subtilis [TaxId: 1423] [82341] (1)
      1. 1mvo
        complexed with mn, na
        
        chain a [79513]
    2. Escherichia coli [TaxId: 562] [159479] (3)
      SQ P23836 1-119
      1. 2pl1
        automatically matched to 2PKX A:1-119
        complexed with bef, mg, pt; mutant
        
        region a:1-119 [149610]
      2. 2pkx
        mutant
        
        region a:1-119 [149606]
      3. 2pkx
        automatically matched to 2PKX A:1-119
        mutant
        
        region b:1-119 [149607]
  11. Response regulator DrrB [89587]
    1. Thermotoga maritima [TaxId: 2336] [89588] (1)
      1. 1p2f
        complexed with mse
        
        region a:1-120 [87721]
  12. Response regulator for cyanobacterial phytochrome [75152]
    1. Synechocystis sp. PCC 6803, RCP1 [TaxId: 1148] [75153] (2)
      1. 1i3c
        complexed with mse, so4
        
        chain a [71112]
        chain b [71113]
      2. 1jlk
        mn(2+)-bound form
        complexed with mn, so4
        
        chain a [71727]
        chain b [71728]
    2. Calothrix sp. pcc 7601, RcpA [TaxId: 1188] [102226] (1)
      1. 1k68
        phosphorylated
        complexed with mg, phd
        
        chain a [90943]
        chain b [90944]
    3. Calothrix sp. pcc 7601, RcpB [TaxId: 1188] [102227] (1)
      1. 1k66
        complexed with bme
        
        chain a [90941]
        chain b [90942]
  13. Cell division response regulator DivK [82342]
    1. Caulobacter crescentus [TaxId: 155892] [82343] (5)
      1. 1mb3
        complexed with mg
        
        chain a [78907]
      2. 1m5t
        
        chain a [78660]
      3. 1mav
        complexed with mn
        
        chain a [78893]
      4. 1m5u
        
        chain a [78661]
      5. 1mb0
        complexed with mn
        
        chain a [78900]
  14. Response regulator Sin1 [102228]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [102229] (3)
      1. 2r25
        automatically matched to d1oxkb_
        complexed with bef, mg, na
        
        region b:1087-1214 [151530]
      2. 1oxk
        complexed with so4
        
        chain b [93691]
        chain d [93693]
        chain f [93695]
        chain h [93697]
        chain j [93699]
        chain l [93701]
      3. 1oxb
        complexed with so4
        
        chain b [93682]
  15. Transcriptional activator sigm54 (NtrC1), N-terminal domain [102230]
    1. Aquifex aeolicus [TaxId: 63363] [102231] (2)
      1. 1ny5
        complexed with adp, gol, mg, po4
        
        region a:1-137 [92317]
        region b:1-137 [92319]
      2. 1zy2
        complexed with mg, phd
        
        region a:1-136 [125811]
  16. DNA-binding response regulator MicA, N-terminal domain [102232]
    1. Streptococcus pneumoniae [TaxId: 1313] [102233] (11)
      1. 2a9p
        automatically matched to d1nxoa_
        complexed with bef, mn
        
        region a:2-118 [126445]
      2. 2a9o
        automatically matched to d1nxoa_
        complexed with bef, mn
        
        region a:2-118 [126444]
      3. 1nxo
        
        chain a [92306]
      4. 1nxp
        complexed with phs
        
        chain a [92307]
      5. 1nxx
        
        chain a [92312]
      6. 1nxw
        complexed with acy
        
        chain a [92311]
      7. 1nxs
        
        chain a [92308]
      8. 1nxv
        
        chain a [92310]
      9. 2a9r
        automatically matched to d1nxoa_
        complexed with mg, phd, xe
        
        region a:2-118 [126447]
      10. 1nxt
        complexed with phd, xe
        
        chain a [92309]
      11. 2a9q
        automatically matched to d1nxoa_
        
        region a:2-118 [126446]
  17. Probable two-component system transcriptional regulator Rv1626 [110464]
    contains extra C-terminal all-alpha subdomain (144-20), 3-helical bundle
    1. Mycobacterium tuberculosis [TaxId: 1773] [110465] (2)
      SQ O06143
      1. 1s8n
        Structural genomics target
        complexed with azi
        
        chain a [105374]
      2. 1sd5
        Structural genomics target
        complexed with iod
        
        chain a [105430]
  18. Response regulator PleD, receiver domain [117472]
    duplication: tandem repeat of 2 CheY-like domains
    1. Caulobacter crescentus [TaxId: 155892] [117473] (5)
      SQ Q9A5I5
      1. 1w25
        complexed with 5gp, mg, zn
        
        region a:2-140 [114090]
        region a:141-293 [114091]
        region b:2-140 [114093]
        region b:141-293 [114094]
      2. 2v0n
        automatically matched to d1w25a1
        complexed with 5gp, bef, cl, gav, mg, so4
        
        region a:2-140 [152365]
      3. 2v0n
        automatically matched to d1w25a2
        complexed with 5gp, bef, cl, gav, mg, so4
        
        region a:141-293 [152366]
      4. 2v0n
        automatically matched to d1w25a1
        complexed with 5gp, bef, cl, gav, mg, so4
        
        region b:2-140 [152368]
      5. 2v0n
        automatically matched to d1w25a2
        complexed with 5gp, bef, cl, gav, mg, so4
        
        region b:141-293 [152369]
  19. Sensor kinase protein RcsC, C-terminal domain [142023]
    1. Escherichia coli [TaxId: 562] [142024] (2)
      SQ P14376 817-949
      1. 2ayx
        
        region a:817-949 [127574]
      2. 2ayz
        C-terminal domain only
        
        region a:817-949 [127577]
  20. Transcriptional regulatory protein KdpE, N-terminal domain [142025]
    1. Escherichia coli [TaxId: 562] [142026] (4)
      SQ P21866 2-120
      1. 1zh2
        complexed with ca; mutant
        
        region a:2-120 [125069]
      2. 1zh2
        automatically matched to 1ZH2 A:2-120
        complexed with ca; mutant
        
        region b:2-120 [125070]
      3. 1zh4
        automatically matched to 1ZH2 A:2-120
        complexed with bef, mg; mutant
        
        region a:2-120 [125071]
      4. 1zh4
        automatically matched to 1ZH2 A:2-120
        complexed with bef, mg; mutant
        
        region b:2-120 [125072]
  21. Response regulatory protein StyR, N-terminal domain [142027]
    1. Pseudomonas fluorescens [TaxId: 294] [142028] (2)
      SQ O30989 3-130
      1. 1yio
        complexed with hg, mg
        
        region a:3-130 [123327]
      2. 1zn2
        automatically matched to 1YIO A:3-130
        complexed with mg
        
        region a:3-130 [125372]
  22. Hypothetical protein BH3024 [142029]
    1. Bacillus halodurans [TaxId: 86665] [142030] (1)
      SQ Q9K8I2 2-119
      1. 2b4a
        complexed with edo
        
        region a:2-119 [127817]
  23. Transcriptional regulatory protein PrrA, N-terminal domain [142031]
    1. Mycobacterium tuberculosis [TaxId: 1773] [142032] (4)
      SQ P0A5Z6 7-127
      1. 1ys7
        automatically matched to 1YS6 A:7-127
        complexed with act, gol, mg, trs
        
        region a:7-127 [123962]
      2. 1ys7
        automatically matched to 1YS6 A:7-127
        complexed with act, gol, mg, trs
        
        region b:7-127 [123964]
      3. 1ys6
        complexed with ca, gol
        
        region a:7-127 [123958]
      4. 1ys6
        automatically matched to 1YS6 A:7-127
        complexed with ca, gol
        
        region b:7-127 [123960]
  24. TorCAD operon transcriptional regulator TorD, N-terminal domain [142033]
    1. Escherichia coli [TaxId: 562] [142034] (4)
      SQ P38684 2-121
      1. 1zgz
        complexed with gol, so4; mutant
        
        region a:2-121 [125065]
      2. 1zgz
        automatically matched to 1ZGZ A:2-121
        complexed with gol, so4; mutant
        
        region b:2-121 [125066]
      3. 1zgz
        automatically matched to 1ZGZ A:2-121
        complexed with gol, so4; mutant
        
        region c:2-121 [125067]
      4. 1zgz
        automatically matched to 1ZGZ A:2-121
        complexed with gol, so4; mutant
        
        region d:2-121 [125068]
  25. Aerobic respiration control protein ArcA, N-terminal domain [142035]
    1. Escherichia coli [TaxId: 562] [142036] (4)
      SQ P0A9Q1 2-122
      1. 1xhf
        automatically matched to 1XHE A:2-122
        complexed with bef, bf2, bf4, mg; mutant
        
        region a:2-122 [122003]
      2. 1xhf
        automatically matched to 1XHE A:2-122
        complexed with bef, bf2, bf4, mg; mutant
        
        region b:2-122 [122004]
      3. 1xhe
        mutant
        
        region a:2-122 [122001]
      4. 1xhe
        automatically matched to 1XHE A:2-122
        mutant
        
        region b:2-122 [122002]
2. Receiver domain of the ethylene receptor [52194] (1)
  1. Receiver domain of the ethylene receptor [52195]
    1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [52196] (1)
      1. 1dcf
        
        chain a [31124]
3. Positive regulator of the amidase operon AmiR [52197] (1)
  1. Positive regulator of the amidase operon AmiR [52198]
    contains coiled coil and small all-alpha subdomains in the C-terminal extension
    1. Pseudomonas aeruginosa [TaxId: 287] [52199] (1)
      1. 1qo0
        
        chain d [31125]
        chain e [31126]
4. Ornithine decarboxylase N-terminal "wing" domain [52252] (1)
  1. Ornithine decarboxylase N-terminal "wing" domain [52253]
    1. Lactobacillus sp., strain 30a [TaxId: 1591] [52254] (2)
      1. 1c4k
        complexed with gtp, plp; mutant
        
        region a:1-107 [31273]
      2. 1ord
        complexed with plp
        
        region a:1-107 [31274]
        region b:1-107 [31275]
5. N-terminal domain of the circadian clock protein KaiA [82344] (1)
  lacks canonical receiver domains features
  1. N-terminal domain of the circadian clock protein KaiA [82345]
    1. Synechococcus elongatus [TaxId: 32046] [82346] (3)
      SQ Q79PF6
      1. 1r8j
        structured linker 136-176 in swapped dimer
        
        region a:1-135 [104848]
        region b:1-135 [104850]
      2. 1m2e
        CASP5
        
        chain a [78478]
      3. 1m2f
        
        chain a [78479]
6. RcsC linker domain-like [142037] (1)
  PfamB 016190; probable rudiment CheY-like domain; precedes the C-terminal CheY-related domain of similar structure
  1. Sensor kinase protein RcsC [142038]
    1. Escherichia coli [TaxId: 562] [142039] (2)
      SQ P14376 700-816
      1. 2ayy
        linker domain only
        
        region a:700-816 [127576]
      2. 2ayx
        
        region a:700-816 [127575]
7. AF1403 C-terminal domain-like [142040] (1)
  1. Hypothetical protein AF1403, C-terminal domain [142041]
    1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [142042] (3)
      SQ O28869 79-217
      1. 1y7p
        complexed with rip, zn
        
        region a:79-217 [122708]
      2. 1y7p
        automatically matched to 1Y7P A:79-217
        complexed with rip, zn
        
        region b:79-215 [122710]
      3. 1y7p
        automatically matched to 1Y7P A:79-217
        complexed with rip, zn
        
        region c:79-217 [122712]
Toll/Interleukin receptor TIR domain [52200] (1)
uperfamily
1. Toll/Interleukin receptor TIR domain [52201] (2)
  1. Toll-like receptor 1, TLR1 [52202]
    1. Human (Homo sapiens) [TaxId: 9606] [52203] (1)
      1. 1fyv
        
        chain a [31127]
  2. Toll-like receptor 2, TLR2 [52204]
    1. Human (Homo sapiens) [TaxId: 9606] [52205] (3)
      1. 1fyx
        complexed with cas; mutant
        
        chain a [31128]
      2. 1fyw
        complexed with cas
        
        chain a [31129]
      3. 1o77
        mutant
        
        chain a [81125]
        chain b [81126]
        chain c [81127]
        chain d [81128]
        chain e [81129]
Hypothetical protein MTH538 [52206] (1)
uperfamily
1. Hypothetical protein MTH538 [52207] (1)
  1. Hypothetical protein MTH538 [52208]
    1. Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262] [52209] (1)
      1. 1eiw
        structural genomics
        
        chain a [31130]
Succinyl-CoA synthetase domains [52210] (1)
uperfamily
1. Succinyl-CoA synthetase domains [52211] (6)
  contain additional N-terminal strand "0", antiparallel to strand 2
  1. Succinyl-CoA synthetase, alpha-chain, C-terminal domain [52212]
    1. Escherichia coli [TaxId: 562] [52213] (18)
      1. 2nu7
        automatically matched to d1oi7a2
        complexed with coa, po4, so4; mutant
        
        region a:122-287 [148405]
      2. 2nu8
        automatically matched to d1oi7a2
        complexed with coa, gol, po4, so4; mutant
        
        region a:122-287 [148413]
      3. 2nu7
        automatically matched to d1oi7a2
        complexed with coa, po4, so4; mutant
        
        region d:122-287 [148409]
      4. 2nu8
        automatically matched to d1oi7a2
        complexed with coa, gol, po4, so4; mutant
        
        region d:122-287 [148417]
      5. 1jkj
        complexed with coa, gol, po4, so4
        
        region a:122-287 [66801]
        region d:122-287 [66805]
      6. 2nu6
        automatically matched to d1oi7a2
        complexed with coa, so4; mutant
        
        region a:122-287 [148397]
      7. 2nu6
        automatically matched to d1oi7a2
        complexed with coa, so4; mutant
        
        region d:122-287 [148401]
      8. 1cqj
        
        region a:122-286 [31133]
        region d:122-286 [31134]
      9. 2scu
        complexed with coa, so4
        
        region a:122-286 [31131]
        region d:122-286 [31132]
      10. 2nu9
        automatically matched to d1oi7a2
        complexed with coa, so4; mutant
        
        region a:122-286 [148421]
      11. 2nu9
        automatically matched to d1oi7a2
        complexed with coa, so4; mutant
        
        region d:122-286 [148425]
      12. 2nu9
        automatically matched to d1oi7a2
        complexed with coa, so4; mutant
        
        region f:122-286 [148429]
      13. 2nu9
        automatically matched to d1oi7a2
        complexed with coa, so4; mutant
        
        region h:122-286 [148433]
      14. 1jll
        complexed with coa, po4, so4; mutant
        
        region a:122-287 [66852]
        region d:122-287 [66856]
      15. 2nua
        automatically matched to d1oi7a2
        complexed with coa, po4, so4; mutant
        
        region a:122-287 [148437]
      16. 2nua
        automatically matched to d1oi7a2
        complexed with coa, po4, so4; mutant
        
        region d:122-287 [148441]
      17. 1cqi
        
        region a:122-286 [31137]
        region d:122-286 [31138]
      18. 1scu
        complexed with coa, phs
        
        region a:122-288 [31135]
        region d:122-288 [31136]
    2. Thermus thermophilus [TaxId: 274] [89589] (1)
      1. 1oi7
        alpha-chain only
        mutant
        
        region a:122-288 [87050]
    3. Pig (Sus scrofa) [TaxId: 9823] [52214] (6)
      1. 1euc
        complexed with po4, so4, zn; mutant
        
        region a:131-306 [31139]
      2. 1eud
        complexed with so4; mutant
        
        region a:131-306 [31140]
      3. 2fp4
        automatically matched to d1euca2
        complexed with gtp, k, mg
        
        region a:131-306 [133896]
      4. 2fpp
        automatically matched to d1euca2
        complexed with cl, so4
        
        region a:131-306 [133916]
      5. 2fpg
        automatically matched to d1euca2
        complexed with gdp, k, po4
        
        region a:131-306 [133901]
      6. 2fpi
        automatically matched to d1euca2
        complexed with so4
        
        region a:131-306 [133905]
  2. Succinyl-CoA synthetase, beta-chain, C-terminal domain [52215]
    1. Escherichia coli [TaxId: 562] [52216] (18)
      1. 2nu7
        automatically matched to d1jkjb1
        complexed with coa, po4, so4; mutant
        
        region b:239-388 [148406]
      2. 2nu7
        automatically matched to d1jkjb1
        complexed with coa, po4, so4; mutant
        
        region e:239-385 [148410]
      3. 2nu8
        automatically matched to d1jkjb1
        complexed with coa, gol, po4, so4; mutant
        
        region b:239-388 [148414]
      4. 2nu8
        automatically matched to d1jkjb1
        complexed with coa, gol, po4, so4; mutant
        
        region e:239-385 [148418]
      5. 1jkj
        complexed with coa, gol, po4, so4
        
        region b:239-388 [66802]
        region e:239-385 [66806]
      6. 2nu6
        automatically matched to d1jkjb1
        complexed with coa, so4; mutant
        
        region b:239-388 [148398]
      7. 2nu6
        automatically matched to d1jkjb1
        complexed with coa, so4; mutant
        
        region e:239-385 [148402]
      8. 1cqj
        
        region b:239-385 [31143]
        region e:239-385 [31144]
      9. 2scu
        complexed with coa, so4
        
        region b:239-385 [31141]
        region e:239-385 [31142]
      10. 2nu9
        automatically matched to d1jkjb1
        complexed with coa, so4; mutant
        
        region b:239-385 [148422]
      11. 2nu9
        automatically matched to d1jkjb1
        complexed with coa, so4; mutant
        
        region e:239-385 [148426]
      12. 2nu9
        automatically matched to d1jkjb1
        complexed with coa, so4; mutant
        
        region g:239-385 [148430]
      13. 2nu9
        automatically matched to d1jkjb1
        complexed with coa, so4; mutant
        
        region i:239-385 [148434]
      14. 1jll
        complexed with coa, po4, so4; mutant
        
        region b:239-388 [66853]
        region e:239-385 [66857]
      15. 2nua
        automatically matched to d1jkjb1
        complexed with coa, po4, so4; mutant
        
        region b:239-388 [148438]
      16. 2nua
        automatically matched to d1jkjb1
        complexed with coa, po4, so4; mutant
        
        region e:239-385 [148442]
      17. 1cqi
        
        region b:239-385 [31147]
        region e:239-385 [31148]
      18. 1scu
        complexed with coa, phs
        
        region b:239-388 [31145]
        region e:239-388 [31146]
    2. Pig (Sus scrofa) [TaxId: 9823] [52217] (6)
      1. 1euc
        complexed with po4, so4, zn; mutant
        
        region b:246-393 [31149]
      2. 1eud
        complexed with so4; mutant
        
        region b:246-394 [31150]
      3. 2fp4
        automatically matched to d1eudb1
        complexed with gtp, k, mg
        
        region b:246-393 [133897]
      4. 2fpp
        automatically matched to d1eudb1
        complexed with cl, so4
        
        region b:246-393 [133917]
      5. 2fpg
        automatically matched to d1eudb1
        complexed with gdp, k, po4
        
        region b:246-393 [133902]
      6. 2fpi
        automatically matched to d1eudb1
        complexed with so4
        
        region b:246-393 [133906]
  3. Acetate-CoA ligase alpha chain, AcdA, domains 2 and 3 [142043]
    duplication: tandem repeat of two similar domains, structurally and functionally related to the C-terminal domains of Succinyl-CoA synthetase subunits; the first domain (2) is related to the alpha-chain domain, whereas the second domain (3) is related to the beta-chain domain
    1. Pyrococcus horikoshii [TaxId: 53953] [142044] (4)
      SQ O58493 130-290! SQ O58493 291-453
      PH0766
      1. 2csu
        
        region a:130-290 [130782]
      2. 2csu
        
        region a:291-453 [130783]
      3. 2csu
        automatically matched to 2CSU A:130-290
        
        region b:130-290 [130785]
      4. 2csu
        automatically matched to 2CSU A:291-453
        
        region b:291-453 [130786]
Flavoproteins [52218] (8)
uperfamily
1. Flavodoxin-related [52219] (13)
  binds FMN
  1. Flavodoxin [52220]
    1. Chondrus crispus [TaxId: 2769] [52221] (1)
      1. 2fcr
        complexed with fmn
        
        chain a [31151]
    2. Desulfovibrio vulgaris [TaxId: 881] [52222] (25)
      SQ P00323
      1. 1f4p
        complexed with fmn; mutant
        
        chain a [59651]
      2. 1j8q
        complexed with fmn
        
        chain a [62744]
      3. 1j9e
        complexed with fmn; mutant
        
        chain a [62756]
      4. 1akr
        complexed with fmn; mutant
        
        chain a [31152]
      5. 1xyv
        complexed with fmn; mutant
        
        chain a [116233]
      6. 1wsw
        complexed with fmn; mutant
        
        chain a [114866]
      7. 1akw
        complexed with fmn; mutant
        
        chain a [31153]
      8. 1wsb
        complexed with fmn; mutant
        
        chain a [114847]
      9. 1azl
        complexed with fmn; mutant
        
        chain a [31154]
      10. 1akt
        complexed with fmn; mutant
        
        chain a [31157]
      11. 1bu5
        complexed with rbf, so4
        
        chain a [31155]
        chain b [31156]
      12. 1xyy
        complexed with fmn; mutant
        
        chain a [116236]
      13. 1akq
        complexed with fmn; mutant
        
        chain a [31159]
      14. 1xt6
        complexed with fmn; mutant
        
        chain a [116012]
      15. 2fx2
        complexed with fmn
        
        chain a [31158]
      16. 1i1o
        complexed with fmn; mutant
        
        chain a [61542]
      17. 1aku
        complexed with fmn, so4; mutant
        
        chain a [31161]
      18. 1akv
        complexed with fmn, so4; mutant
        
        chain a [31162]
      19. 1c7f
        complexed with fmn; mutant
        
        chain a [31163]
        chain b [31164]
      20. 3fx2
        complexed with fmn
        
        chain a [31160]
      21. 4fx2
        complexed with fmn
        
        chain a [31165]
      22. 5fx2
        complexed with fmn
        
        chain a [31166]
      23. 1j9g
        complexed with fmn; mutant
        
        chain a [62757]
      24. 1c7e
        complexed with fmn; mutant
        
        chain a [31167]
        chain b [31168]
      25. 1fx1
        complexed with fmn
        
        chain a [31169]
    3. Anabaena, pcc 7119 and 7120 [TaxId: 1163] [52223] (7)
      1. 1obo
        complexed with fmn, so4; mutant
        
        chain a [86776]
        chain b [86777]
      2. 1rcf
        complexed with fmn, so4
        
        chain a [31170]
      3. 1dx9
        apo form
        complexed with so4; mutant
        
        chain a [31171]
        chain b [31172]
        chain c [31173]
        chain d [31174]
      4. 1obv
        complexed with fmn, so4; mutant
        
        chain a [86782]
      5. 1ftg
        apo form
        complexed with so4
        
        chain a [31176]
      6. 1qhe
        complexed with so4
        
        chain a [31177]
      7. 1flv
        complexed with fmn
        
        chain a [31175]
    4. Escherichia coli [TaxId: 562] [52224] (2)
      1. 1ag9
        complexed with btb, ca, cl, fmn, na
        
        chain a [31178]
        chain b [31179]
      2. 1ahn
        complexed with ca, fmn
        
        chain a [31180]
    5. Synechococcus elongatus PCC 7942 [TaxId: 1140] [52225] (10)
      1. 1czn
        
        chain a [31181]
      2. 1d03
        
        chain a [31182]
      3. 1czo
        
        chain a [31188]
      4. 1czl
        
        chain a [31183]
      5. 1czk
        
        chain a [31186]
      6. 1czh
        
        chain a [31185]
      7. 1d04
        
        chain a [31189]
      8. 1czr
        
        chain a [31187]
      9. 1ofv
        complexed with fmn
        
        chain a [31184]
      10. 1czu
        
        chain a [31190]
    6. Clostridium beijerinckii [TaxId: 1520] [52226] (16)
      1. 5nul
        complexed with fmn; mutant
        
        chain a [31191]
      2. 2flv
        complexed with fmn; mutant
        
        chain a [31193]
      3. 2fax
        complexed with fmn; mutant
        
        chain a [31194]
      4. 2fdx
        complexed with fmn; mutant
        
        chain a [31192]
      5. 6nul
        complexed with fmn; mutant
        
        chain a [31195]
      6. 1fld
        complexed with fmn; mutant
        
        chain a [31199]
      7. 2fvx
        complexed with fmn; mutant
        
        chain a [31200]
      8. 5nll
        complexed with fmn
        
        chain a [31198]
      9. 1fln
        complexed with fmn; mutant
        
        chain a [31202]
      10. 4nul
        complexed with fmn; mutant
        
        chain a [31201]
      11. 2fox
        complexed with fmn
        
        chain a [31197]
      12. 5ull
        complexed with fmn
        
        chain a [31196]
      13. 1fvx
        complexed with fmn; mutant
        
        chain a [31204]
      14. 4nll
        complexed with fmn; mutant
        
        chain a [31203]
      15. 1fla
        complexed with fmn; mutant
        
        chain a [31205]
      16. 3nll
        complexed with fmn; mutant
        
        chain a [31206]
    7. Helicobacter pylori [TaxId: 210] [69446] (1)
      1. 1fue
        complexed with fmn
        
        chain a [65054]
    8. Megasphaera elsdenii [TaxId: 907] [142045] (1)
      SQ P00321 1-137
      1. 2fz5
        complexed with fnr
        
        region a:1-137 [134420]
    9. Azotobacter vinelandii [TaxId: 354] [142046] (2)
      SQ P00324 1-179
      1. 1yob
        complexed with fmn, so4; mutant
        
        region a:1-179 [123776]
      2. 1yob
        automatically matched to 1YOB A:1-179
        complexed with fmn, so4; mutant
        
        region b:1-179 [123777]
  2. FMN-binding domain of the cytochrome P450bm-3 [52227]
    1. Bacillus megaterium [TaxId: 1404] [52228] (1)
      1. 1bvy
        complexed with eth, fmn, hem
        
        chain f [31207]
  3. Rubredoxin oxygen:oxidoreductase (ROO), C-terminal domain [52229]
    1. Desulfovibrio gigas [TaxId: 879] [52230] (1)
      1. 1e5d
        complexed with feo, fmn, oxy
        
        region a:251-402 [31208]
        region b:251-402 [31209]
  4. ROO-like flavoprotein TM0755, C-terminal domain [110466]
    1. Thermotoga maritima [TaxId: 2336] [110467] (1)
      SQ Q9WZL4
      1. 1vme
        Structural genomics target
        complexed with cl, edo, feo
        
        region a:251-398 [108893]
        region b:251-398 [108895]
  5. Nitric oxide reductase C-terminal domain [142047]
    1. Moorella thermoacetica [TaxId: 1525] [142048] (12)
      SQ Q9FDN7 251-399
      1. 1ycg
        automatically matched to 1YCF A:251-399
        complexed with edo, feo, fmn, zn
        
        region a:251-399 [122949]
      2. 1ycg
        automatically matched to 1YCF A:251-399
        complexed with edo, feo, fmn, zn
        
        region b:251-399 [122951]
      3. 1ycg
        automatically matched to 1YCF A:251-399
        complexed with edo, feo, fmn, zn
        
        region c:251-399 [122953]
      4. 1ycg
        automatically matched to 1YCF A:251-399
        complexed with edo, feo, fmn, zn
        
        region d:251-399 [122955]
      5. 1ycf
        complexed with feo, fmn, oxy, zn
        
        region a:251-399 [122941]
      6. 1ycf
        automatically matched to 1YCF A:251-399
        complexed with feo, fmn, oxy, zn
        
        region b:251-399 [122943]
      7. 1ycf
        automatically matched to 1YCF A:251-399
        complexed with feo, fmn, oxy, zn
        
        region c:251-399 [122945]
      8. 1ycf
        automatically matched to 1YCF A:251-399
        complexed with feo, fmn, oxy, zn
        
        region d:251-399 [122947]
      9. 1ych
        automatically matched to 1YCF A:251-399
        complexed with feo, fmn, zn
        
        region a:251-399 [122957]
      10. 1ych
        automatically matched to 1YCF A:251-399
        complexed with feo, fmn, zn
        
        region b:251-399 [122959]
      11. 1ych
        automatically matched to 1YCF A:251-399
        complexed with feo, fmn, zn
        
        region c:251-399 [122961]
      12. 1ych
        automatically matched to 1YCF A:251-399
        complexed with feo, fmn, zn
        
        region d:251-399 [122963]
2. Cytochrome p450 reductase N-terminal domain-like [52231] (4)
  1. NADPH-cytochrome p450 reductase, N-terminal domain [52232]
    1. Rat (Rattus norvegicus) [TaxId: 10116] [52233] (4)
      1. 1ja1
        complexed with epe, fad, fmn, nap; mutant
        
        region a:63-239 [62804]
        region b:65-239 [62807]
      2. 1amo
        complexed with fad, fmn, nap
        
        region a:64-235 [31210]
        region b:64-235 [31211]
      3. 1j9z
        complexed with fad, fmn, nap; mutant
        
        region a:63-239 [62793]
        region b:64-239 [62796]
      4. 1ja0
        complexed with fad, fmn, nap
        
        region a:63-239 [62799]
    2. Human (Homo sapiens) [TaxId: 9606] [52234] (1)
      1. 1b1c
        
        chain a [31212]
  2. Nitric oxide (NO) synthase FMN domain [110468]
    1. Rat (Rattus norvegicus) [TaxId: 10116] [110469] (1)
      SQ P29476 750-1413
      1. 1tll
        complexed with fad, fmn, nap, so3
        
        region a:750-951 [107129]
        region b:2752-2952 [107132]
  3. Sulfite reductase alpha-component CysJ N-terminal domain [142049]
    1. Escherichia coli [TaxId: 562] [142050] (1)
      SQ P38038 63-208
      1. 1ykg
        N-domain only; the structures of the other domains are also known (scop_sp 50442, 52369)
        complexed with fmn
        
        region a:63-208 [123517]
3. Quinone reductase [52235] (6)
  binds FAD
  1. NAD(P)H:quinone reductase [52236]
    1. Mouse (Mus musculus) [TaxId: 10090] [52237] (1)
      1. 1dxq
        complexed with fad
        
        chain a [31213]
        chain b [31214]
        chain c [31215]
        chain d [31216]
    2. Rat (Rattus rattus) [TaxId: 10117] [52238] (1)
      1. 1qrd
        complexed with cbd, dqn, fad
        
        chain a [31217]
        chain b [31218]
    3. Human (Homo sapiens) [TaxId: 9606] [52239] (16)
      1. 1d4a
        complexed with fad
        
        chain a [31219]
        chain b [31220]
        chain c [31221]
        chain d [31222]
      2. 1kbq
        complexed with 936, fad
        
        chain a [68391]
        chain b [68392]
        chain c [68393]
        chain d [68394]
      3. 1h69
        complexed with arh, fad
        
        chain a [60665]
        chain b [60666]
        chain c [60667]
        chain d [60668]
      4. 1h66
        complexed with fad, rh1
        
        chain a [60660]
        chain b [60661]
        chain c [60662]
        chain d [60663]
      5. 1kbo
        complexed with 340, fad
        
        chain a [68387]
        chain b [68388]
        chain c [68389]
        chain d [68390]
      6. 1dxo
        complexed with dqn, fad
        
        chain a [31223]
        chain b [31224]
        chain c [31225]
        chain d [31226]
      7. 1gg5
        complexed with e09, fad
        
        chain a [60480]
        chain b [60481]
        chain c [60482]
        chain d [60483]
      8. 1qbg
        complexed with fad
        
        chain a [31227]
        chain b [31228]
        chain c [31229]
        chain d [31230]
      9. 2f1o
        automatically matched to d1d4aa_
        complexed with dtc, fad
        
        region a:1-273 [132783]
      10. 2f1o
        automatically matched to d1d4aa_
        complexed with dtc, fad
        
        region b:1-273 [132784]
      11. 2f1o
        automatically matched to d1d4aa_
        complexed with dtc, fad
        
        region c:1-273 [132785]
      12. 2f1o
        automatically matched to d1d4aa_
        complexed with dtc, fad
        
        region d:1-273 [132786]
      13. 2f1o
        automatically matched to d1d4aa_
        complexed with dtc, fad
        
        region e:1-273 [132787]
      14. 2f1o
        automatically matched to d1d4aa_
        complexed with dtc, fad
        
        region f:1-273 [132788]
      15. 2f1o
        automatically matched to d1d4aa_
        complexed with dtc, fad
        
        region g:1-273 [132789]
      16. 2f1o
        automatically matched to d1d4aa_
        complexed with dtc, fad
        
        region h:1-273 [132790]
  2. Quinone reductase type 2 (menadione reductase) [52240]
    1. Human (Homo sapiens) [TaxId: 9606] [52241] (24)
      1. 2qwx
        automatically matched to d1qr2a_
        complexed with fad, ml1, zn
        
        region a:1-230 [151441]
      2. 2qwx
        automatically matched to d1qr2a_
        complexed with fad, ml1, zn
        
        region b:1-230 [151442]
      3. 1sg0
        automatically matched to d1qr2a_
        complexed with fad, stl, zn
        
        region a:1-230 [118955]
      4. 1sg0
        automatically matched to d1qr2a_
        complexed with fad, stl, zn
        
        region b:1-230 [118956]
      5. 1xi2
        automatically matched to d1qr2a_
        complexed with cb1, fad, zn
        
        region a:1-230 [122012]
      6. 1xi2
        automatically matched to d1qr2a_
        complexed with cb1, fad, zn
        
        region b:1-230 [122013]
      7. 2qx4
        automatically matched to d1qr2a_
        complexed with fad, ml1, zn
        
        region a:1-230 [151447]
      8. 2qx4
        automatically matched to d1qr2a_
        complexed with fad, ml1, zn
        
        region b:1-230 [151448]
      9. 2qx8
        automatically matched to d1qr2a_
        complexed with cl, fad, gol, ml2, zn
        
        region a:1-230 [151451]
      10. 2qx8
        automatically matched to d1qr2a_
        complexed with cl, fad, gol, ml2, zn
        
        region b:1-230 [151452]
      11. 2qx6
        automatically matched to d1qr2a_
        complexed with fad, ml1, zn
        
        region a:1-230 [151449]
      12. 2qx6
        automatically matched to d1qr2a_
        complexed with fad, ml1, zn
        
        region b:1-230 [151450]
      13. 2bzs
        automatically matched to d1qr2a_
        complexed with cb1, fad, zn
        
        region a:1-230 [129560]
      14. 2bzs
        automatically matched to d1qr2a_
        complexed with cb1, fad, zn
        
        region b:1-230 [129561]
      15. 2qmz
        automatically matched to d1qr2a_
        complexed with fad, ldp, zn
        
        region a:1-230 [150905]
      16. 2qmz
        automatically matched to d1qr2a_
        complexed with fad, ldp, zn
        
        region b:1-230 [150906]
      17. 1zx1
        automatically matched to d1qr2a_
        complexed with cb1, fad, zn
        
        region a:1-228 [125760]
      18. 1zx1
        automatically matched to d1qr2a_
        complexed with cb1, fad, zn
        
        region b:2-230 [125761]
      19. 1qr2
        complexed with fad, zn
        
        chain a [31231]
        chain b [31232]
      20. 2qr2
        complexed with fad, vk3, zn
        
        chain a [31233]
        chain b [31234]
      21. 2qx9
        automatically matched to d1qr2a_
        complexed with fad, ml2, zn
        
        region a:1-230 [151453]
      22. 2qx9
        automatically matched to d1qr2a_
        complexed with fad, ml2, zn
        
        region b:1-230 [151454]
      23. 2qmy
        automatically matched to d1qr2a_
        complexed with ad1, fad, zn
        
        region a:1-230 [150903]
      24. 2qmy
        automatically matched to d1qr2a_
        complexed with ad1, fad, zn
        
        region b:1-230 [150904]
  3. ACP phosphodiesterase AcpD [110470]
    evolved new enzymatic activity
    1. Escherichia coli [TaxId: 562] [110471] (8)
      SQ P41407
      1. 2z98
        automatically matched to d1tika_
        complexed with edo, fmn
        
        region a:1-200 [154234]
      2. 2z9b
        automatically matched to d1tika_
        complexed with edo, fmn
        
        region a:1-200 [154237]
      3. 1v4b
        automatically matched to d1tika_
        complexed with edo, fmn, ipa
        
        region a:1-200 [119834]
      4. 2z9d
        automatically matched to d1tika_
        complexed with fmn
        
        region a:1-200 [154239]
      5. 2z9d
        automatically matched to d1tika_
        complexed with fmn
        
        region b:1-200 [154240]
      6. 1tik
        Structural genomics target
        complexed with so4
        
        chain a [107003]
      7. 2z9c
        automatically matched to d1tika_
        complexed with dtc, fmn, gol
        
        region a:1-200 [154238]
      8. 2d5i
        automatically matched to d1tika_
        complexed with fmn, gol
        
        region a:1-200 [131270]
    2. Salmonella typhimurium [TaxId: 90371] [110472] (1)
      SQ Q8XFP4
      1. 1t5b
        Structural genomics target
        complexed with FMN
        complexed with fmn
        
        chain a [106433]
        chain b [106434]
4. Hypothetical protein SP1951 [102234] (1)
  1. Hypothetical protein SP1951 [102235]
    1. (Streptococcus pneumoniae) [TaxId: 1313] [102236] (3)
      1. 1sqs
        structural genomics; NESG target SPR27
        complexed with tar
        
        chain a [98968]
        chain b [98969]
      2. 2oys
        automatically matched to d1sqsa_
        complexed with edo, fmn
        
        region a:2-231 [139437]
      3. 2oys
        automatically matched to d1sqsa_
        complexed with edo, fmn
        
        region b:2-231 [139438]
5. Hypothetical protein YwqN [102237] (1)
  1. Hypothetical protein YwqN [102238]
    Trp repressor binding protein
    1. Bacillus subtilis [TaxId: 1423] [102239] (1)
      1. 1rli
        complexed with po4, pt
        
        chain a [97647]
        chain b [97648]
        chain c [97649]
        chain d [97650]
6. NADPH-dependent FMN reductase [89590] (4)
  Pfam 03358
  1. Azobenzene reductase [89591]
    1. Bacillus subtilis [TaxId: 1423] [89592] (5)
      YhdA gene product
      1. 1nni
        structural genomics
        complexed with fmn, mse
        
        chain 1 [85904]
      2. 2gsw
        automatically matched to d1nni1_
        complexed with fmn
        
        region a:3-170 [135595]
      3. 2gsw
        automatically matched to d1nni1_
        complexed with fmn
        
        region b:3-170 [135596]
      4. 2gsw
        automatically matched to d1nni1_
        complexed with fmn
        
        region c:3-170 [135597]
      5. 2gsw
        automatically matched to d1nni1_
        complexed with fmn
        
        region d:3-170 [135598]
  2. Hypothetical protein Ylr011wp [110473]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [110474] (1)
      SQ Q07923
      1. 1t0i
        complexed with ca, fmn
        
        chain a [106209]
        chain b [106210]
  3. Hypothetical protein PA1204 [110475]
    1. Pseudomonas aeruginosa [TaxId: 287] [110476] (2)
      SQ Q9I4D4 5-167
      1. 1rtt
        complexed with so4
        
        chain a [105098]
      2. 1x77
        Structural genomics target
        complexed with fmn
        
        chain a [109496]
        chain b [109497]
  4. Putative arsenical resistance protein [142051]
    1. Shigella flexneri [TaxId: 623] [142052] (4)
      SQ Q7UC03 1-233
      1. 2fzv
        complexed with ca, cl
        
        region a:1-233 [134478]
      2. 2fzv
        automatically matched to 2FZV A:1-233
        complexed with ca, cl
        
        region b:1-233 [134479]
      3. 2fzv
        automatically matched to 2FZV A:1-233
        complexed with ca, cl
        
        region c:1-231 [134480]
      4. 2fzv
        automatically matched to 2FZV A:1-233
        complexed with ca, cl
        
        region d:1-233 [134481]
7. Flavoprotein NrdI [110477] (1)
  1. Flavoprotein NrdI [110478]
    1. Bacillus subtilis [TaxId: 1423] [110479] (1)
      SQ P50618
      1. 1rlj
        Structural genomics target
        complexed with fmn, iod
        
        chain a [104983]
8. WrbA-like [117474] (3)
  1. Trp repressor binding protein WrbA [117475]
    1. Deinococcus radiodurans [TaxId: 1299] [117476] (9)
      SQ Q9RYU4
      1. 1ydg
        Structural genomics target
        complexed with so4
        
        chain a [116614]
        chain b [116615]
        chain c [116616]
        chain d [116617]
        chain e [116618]
        chain f [116619]
        chain g [116620]
        chain h [116621]
      2. 1yrh
        complexed with fmn
        
        region a:4-199 [123923]
      3. 1yrh
        automatically matched to 1YRH A:4-199
        complexed with fmn
        
        region b:4-199 [123924]
      4. 1yrh
        automatically matched to 1YRH A:4-199
        complexed with fmn
        
        region c:4-199 [123925]
      5. 1yrh
        automatically matched to 1YRH A:4-199
        complexed with fmn
        
        region d:4-199 [123926]
      6. 1yrh
        automatically matched to 1YRH A:4-199
        complexed with fmn
        
        region e:4-199 [123927]
      7. 1yrh
        automatically matched to 1YRH A:4-199
        complexed with fmn
        
        region f:4-199 [123928]
      8. 1yrh
        automatically matched to 1YRH A:4-199
        complexed with fmn
        
        region g:4-199 [123929]
      9. 1yrh
        automatically matched to 1YRH A:4-199
        complexed with fmn
        
        region h:4-199 [123930]
    2. Pseudomonas aeruginosa [TaxId: 287] [142053] (5)
      SQ Q9I509 3-198! SQ Q9I509 4-196
      1. 2a5l
        complexed with mg
        
        region a:3-198 [126176]
      2. 2a5l
        automatically matched to 2A5L A:3-198
        complexed with mg
        
        region b:3-198 [126177]
      3. 1zwk
        complexed with po4
        
        region a:4-196 [125745]
      4. 1zwk
        automatically matched to 1ZWK A:4-196
        complexed with po4
        
        region b:4-196 [125746]
      5. 1zwl
        automatically matched to 1ZWK A:4-196
        complexed with fmn
        
        region a:4-196 [125747]
  2. Flavodoxin FldA [142054]
    1. Aquifex aeolicus [TaxId: 63363] [142055] (6)
      SQ O67866 1-184
      1. 2ark
        complexed with gol, po4
        
        region a:1-184 [127202]
      2. 2ark
        automatically matched to 2ARK A:1-184
        complexed with gol, po4
        
        region b:1-184 [127203]
      3. 2ark
        automatically matched to 2ARK A:1-184
        complexed with gol, po4
        
        region c:1-184 [127204]
      4. 2ark
        automatically matched to 2ARK A:1-184
        complexed with gol, po4
        
        region d:1-184 [127205]
      5. 2ark
        automatically matched to 2ARK A:1-184
        complexed with gol, po4
        
        region e:1-184 [127206]
      6. 2ark
        automatically matched to 2ARK A:1-184
        complexed with gol, po4
        
        region f:1-184 [127207]
Cobalamin (vitamin B12)-binding domain [52242] (1)
uperfamily
1. Cobalamin (vitamin B12)-binding domain [52243] (6)
  1. Methionine synthase, C-terminal domain [52244]
    1. Escherichia coli [TaxId: 562] [52245] (4)
      1. 3bul
        automatically matched to d1bmta2
        complexed with b12; mutant
        
        region a:741-896 [155621]
      2. 1bmt
        complexed with cob
        
        region a:741-896 [31235]
        region b:741-896 [31236]
      3. 1k7y
        complexed with b12, so4; mutant
        
        region a:741-900 [68273]
      4. 1k98
        complexed with b12, so4; mutant
        
        region a:741-900 [68339]
  2. Glutamate mutase, small subunit [52246]
    1. Clostridium tetanomorphum [TaxId: 1553] [52247] (3)
      1. 1fmf
        mutant
        
        chain a [65036]
      2. 1id8
        complexed with dbi, fop; mutant
        
        chain a [62295]
      3. 1be1
        mutant
        
        chain a [31237]
    2. Clostridium cochlearium [TaxId: 1494] [52248] (4)
      1. 1ccw
        complexed with cnc, tar; mutant
        
        chain a [31238]
        chain c [31239]
      2. 1i9c
        complexed with 3md, 5ad, b12, glu; mutant
        
        chain a [71136]
        chain c [71138]
      3. 1cb7
        complexed with cob, tar; mutant
        
        chain a [31240]
        chain c [31241]
      4. 1b1a
        mutant
        
        chain a [31242]
  3. Methylmalonyl-CoA mutase alpha subunit, C-terminal domain [88717]
    active subunit; binds B12
    1. Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744] [88718] (8)
      1. 7req
        complexed with 2cp, b12, gol; mutant
        
        region a:561-728 [31243]
        region c:561-728 [31245]
      2. 1req
        complexed with b12, dca, gol; mutant
        
        region a:561-728 [31247]
        region c:561-728 [31249]
      3. 6req
        complexed with 3cp, b12, gol; mutant
        
        region a:561-728 [31251]
        region c:561-728 [31253]
      4. 4req
        complexed with 5ad, b12, gol, mca, sca; mutant
        
        region a:561-728 [31255]
        region c:561-728 [31257]
      5. 5req
        complexed with b12, gol, mcd, scd; mutant
        
        region a:561-728 [31259]
        region c:561-728 [31261]
      6. 1e1c
        complexed with b12, dca; mutant
        
        region a:561-728 [31263]
        region c:561-728 [31265]
      7. 2req
        complexed with b12, coa; mutant
        
        region a:561-728 [31267]
        region c:561-728 [31269]
      8. 3req
        complexed with aco; mutant
        
        region a:561-728 [31271]
  4. Methylmalonyl-CoA mutase beta subunit, C-terminal domain [88719]
    inactive subunit
    1. Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744] [88720] (8)
      1. 7req
        complexed with 2cp, b12, gol; mutant
        
        region b:476-638 [31244]
        region d:476-638 [31246]
      2. 1req
        complexed with b12, dca, gol; mutant
        
        region b:476-638 [31248]
        region d:476-638 [31250]
      3. 6req
        complexed with 3cp, b12, gol; mutant
        
        region b:476-638 [31252]
        region d:476-638 [31254]
      4. 4req
        complexed with 5ad, b12, gol, mca, sca; mutant
        
        region b:476-638 [31256]
        region d:476-638 [31258]
      5. 5req
        complexed with b12, gol, mcd, scd; mutant
        
        region b:476-638 [31260]
        region d:476-638 [31262]
      6. 1e1c
        complexed with b12, dca; mutant
        
        region b:476-638 [31264]
        region d:476-638 [31266]
      7. 2req
        complexed with b12, coa; mutant
        
        region b:476-637 [31268]
        region d:476-637 [31270]
      8. 3req
        complexed with aco; mutant
        
        region b:476-637 [31272]
  5. D-lysine 5,6-aminomutase beta subunit KamE, C-terminal domain [117477]
    most similar to the glutamate mutase subunit
    1. Clostridium sticklandii [TaxId: 1511] [117478] (1)
      SQ Q9ZFE5
      1. 1xrs
        complexed with 5ad, b12, plp
        
        region b:102-261 [115884]
N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) [52255] (1)
uperfamily
1. N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) [52256] (4)
  1. N5-CAIR mutase (phosphoribosylaminoimidazole carboxylase, PurE) [52257]
    1. Escherichia coli [TaxId: 562] [52258] (3)
      1. 1qcz
        
        chain a [31276]
      2. 2ate
        automatically matched to d1qcza_
        complexed with nia
        
        region a:8-169 [127289]
      3. 1d7a
        
        chain a [31277]
        chain b [31278]
        chain c [31279]
        chain d [31280]
        chain l [31281]
        chain m [31282]
        chain n [31283]
        chain o [31284]
    2. Thermotoga maritima [TaxId: 2336] [89593] (1)
      TM0446
      1. 1o4v
        structural genomics
        complexed with so4
        
        chain a [86628]
    3. Acetobacter aceti [TaxId: 435] [110480] (5)
      SQ Q72LC1
      1. 1u11
        complexed with cit
        
        chain a [107576]
        chain b [107577]
      2. 2fw1
        automatically matched to d1u11b_
        complexed with acy
        
        region a:20-178 [134229]
      3. 2fw1
        automatically matched to d1u11b_
        complexed with acy
        
        region b:20-178 [134230]
      4. 2fwj
        automatically matched to d1u11b_
        complexed with air
        
        region a:20-178 [134243]
      5. 2fwj
        automatically matched to d1u11b_
        complexed with air
        
        region b:20-178 [134244]
    4. Bacillus anthracis [TaxId: 1392] [117479] (1)
      SQ Q81ZH8
      1. 1xmp
        
        chain a [115521]
        chain b [115522]
        chain c [115523]
        chain d [115524]
        chain e [115525]
        chain f [115526]
        chain g [115527]
        chain h [115528]
SGNH hydrolase [52266] (9)
uperfamily
1. Esterase [52267] (1)
  1. Esterase [52268]
    1. Streptomyces scabies [TaxId: 1930] [52269] (3)
      1. 1esc
        
        chain a [31334]
      2. 1esd
        complexed with mps
        
        chain a [31335]
      3. 1ese
        complexed with dep
        
        chain a [31336]
2. Esterase domain of haemagglutinin-esterase-fusion glycoprotein HEF1 [52270] (1)
  1. Esterase domain of haemagglutinin-esterase-fusion glycoprotein HEF1 [52271]
    includes irregular N- and C-terminal extensions
    1. Influenza C virus [TaxId: 11552] [52272] (1)
      1. 1flc
        
        region a:1-150,a:307-427 [31337]
        region c:1-150,c:307-427 [31338]
        region e:1-150,e:307-427 [31339]
3. Acetylhydrolase [52273] (3)
  1. Platelet-activating factor acetylhydrolase [52274]
    1. Cow (Bos taurus), alpha1 [TaxId: 9913] [52275] (6)
      1. 1es9
        mutant
        
        chain a [31340]
      2. 1wab
        complexed with act
        
        chain a [31341]
      3. 1bwp
        mutant
        
        chain a [31342]
      4. 1fxw
        heterodimer with alpha2 subunit
        complexed with ca
        
        chain a [65057]
      5. 1bwq
        mutant
        
        chain a [31343]
      6. 1bwr
        mutant
        
        chain a [31344]
    2. Cow (Bos taurus), alpha2 [TaxId: 9913] [88721] (11)
      1. 1fxw
        heterodimer with alpha1 subunit
        complexed with ca
        
        chain f [65058]
      2. 1vyh
        automatically matched to d1fxwf_
        
        region a:6-217 [120520]
      3. 1vyh
        automatically matched to d1fxwf_
        
        region b:6-217 [120521]
      4. 1vyh
        automatically matched to d1fxwf_
        
        region e:6-217 [120522]
      5. 1vyh
        automatically matched to d1fxwf_
        
        region f:6-217 [120523]
      6. 1vyh
        automatically matched to d1fxwf_
        
        region i:6-217 [120524]
      7. 1vyh
        automatically matched to d1fxwf_
        
        region j:6-217 [120525]
      8. 1vyh
        automatically matched to d1fxwf_
        
        region m:6-217 [120526]
      9. 1vyh
        automatically matched to d1fxwf_
        
        region n:6-217 [120527]
      10. 1vyh
        automatically matched to d1fxwf_
        
        region q:6-217 [120528]
      11. 1vyh
        automatically matched to d1fxwf_
        
        region r:6-217 [120529]
  2. Uncharacterized protein SP1450 [159480]
    Putative platelet activating factor
    1. Streptococcus pneumoniae [TaxId: 1313] [159481] (4)
      SQ Q97PY9 1-211
      1. 2hsj
        complexed with gol, mg
        
        region a:1-211 [147389]
      2. 2hsj
        automatically matched to 2HSJ A:1-211
        complexed with gol, mg
        
        region b:1-211 [147390]
      3. 2hsj
        automatically matched to 2HSJ A:1-211
        complexed with gol, mg
        
        region c:1-211 [147391]
      4. 2hsj
        automatically matched to 2HSJ A:1-211
        complexed with gol, mg
        
        region d:1-211 [147392]
4. Rhamnogalacturonan acetylesterase [52276] (1)
  1. Rhamnogalacturonan acetylesterase [52277]
    1. Fungus (Aspergillus aculeatus) [TaxId: 5053] [52278] (4)
      1. 1k7c
        complexed with man, nag, so4
        
        chain a [68267]
      2. 1deo
        complexed with man, nag, so4
        
        chain a [31345]
      3. 1dex
        complexed with man, nag
        
        chain a [31346]
      4. 1pp4
        complexed with nag
        
        chain a [94970]
        chain b [94971]
5. TAP-like [89594] (2)
  1. Thioesterase I, TAP [89595]
    multifunctional enzyme with thioesterase, esterase, protease and lysophospholiase activities
    1. Escherichia coli [TaxId: 562] [89596] (5)
      SQ P29679 27-205
      1. 1jrl
        complexed with imd, so4; mutant
        
        chain a [84205]
      2. 1ivn
        complexed with gol, so4
        
        chain a [83719]
      3. 1v2g
        complexed with imd, oca, so4; mutant
        
        chain a [113495]
      4. 1u8u
        automatically matched to d1ivna_
        complexed with gol, oca, so4
        
        region a:1-180 [119634]
      5. 1j00
        complexed with sdp, so4
        
        chain a [83854]
  2. Lipase/acylhydrolase [142056]
    1. Enterococcus faecalis [TaxId: 1351] [142057] (1)
      SQ Q839J6 1-195
      1. 1yzf
        
        region a:1-195 [124275]
6. Hypothetical protein alr1529 [102240] (1)
  1. Hypothetical protein alr1529 [102241]
    putative lipase
    1. Nostoc sp. pcc 7120 [TaxId: 103690] [102242] (5)
      1. 1z8h
        automatically matched to d1vjga_
        complexed with ipa, unl
        
        region a:5-205 [124699]
      2. 1z8h
        automatically matched to d1vjga_
        complexed with ipa, unl
        
        region b:7-205 [124700]
      3. 1z8h
        automatically matched to d1vjga_
        complexed with ipa, unl
        
        region c:6-205 [124701]
      4. 1z8h
        automatically matched to d1vjga_
        complexed with ipa, unl
        
        region d:6-205 [124702]
      5. 1vjg
        
        chain a [100810]
7. Putative acetylxylan esterase-like [142058] (2)
  Pfam 03629 (DUF303); contains a characteristic zinc(less) finger-like insertion after strand 1; lacks the conserved in other families Asn residue
  1. Putative acetylxylan esterase At4g34215 [142059]
    1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [142060] (4)
      SQ Q8L9J9 17-260
      1. 2apj
        complexed with seb
        
        region a:17-260 [127128]
      2. 2apj
        automatically matched to 2APJ A:17-260
        complexed with seb
        
        region b:18-260 [127129]
      3. 2apj
        automatically matched to 2APJ A:17-260
        complexed with seb
        
        region c:20-260 [127130]
      4. 2apj
        automatically matched to 2APJ A:17-260
        complexed with seb
        
        region d:20-260 [127131]
  2. Acetylxylan esterase related enzyme [142061]
    1. Clostridium acetobutylicum [TaxId: 1488] [142062] (6)
      SQ Q97LM8 1-282
      1. 1zmb
        
        region a:1-282 [125355]
      2. 1zmb
        automatically matched to 1ZMB A:1-282
        
        region b:1-282 [125356]
      3. 1zmb
        automatically matched to 1ZMB A:1-282
        
        region c:1-282 [125357]
      4. 1zmb
        automatically matched to 1ZMB A:1-282
        
        region d:1-282 [125358]
      5. 1zmb
        automatically matched to 1ZMB A:1-282
        
        region e:1-282 [125359]
      6. 1zmb
        automatically matched to 1ZMB A:1-282
        
        region f:1-282 [125360]
8. YxiM C-terminal domain-like [159482] (1)
  subfamily of Pfam 00657
  1. Hypothetical protein YxiM [159483]
    1. Bacillus subtilis [TaxId: 1423] [159484] (1)
      SQ P42304 175-382
      1. 2o14
        complexed with mn, so4
        
        region a:160-367 [148545]
9. BT2961-like [159485] (2)
  PfamB 005894;homotrimeric assembly
  1. Uncharacterized protein BT2961 [159486]
    putative lipase
    1. Bacteroides thetaiotaomicron [TaxId: 818] [159487] (6)
      SQ Q8A3J3 38-285
      1. 3bzw
        complexed with act, so4
        
        region a:38-285 [155792]
      2. 3bzw
        automatically matched to 3BZW A:38-285
        complexed with act, so4
        
        region b:39-285 [155793]
      3. 3bzw
        automatically matched to 3BZW A:38-285
        complexed with act, so4
        
        region c:39-285 [155794]
      4. 3bzw
        automatically matched to 3BZW A:38-285
        complexed with act, so4
        
        region d:39-285 [155795]
      5. 3bzw
        automatically matched to 3BZW A:38-285
        complexed with act, so4
        
        region e:39-285 [155796]
      6. 3bzw
        automatically matched to 3BZW A:38-285
        complexed with act, so4
        
        region f:39-285 [155797]
  2. Uncharacterized protein Lp3323 [159488]
    1. Lactobacillus plantarum [TaxId: 1590] [159489] (3)
      SQ Q88SR8 18-224
      1. 3dc7
        complexed with mg, na, so4
        
        region a:18-224 [157532]
      2. 3dc7
        automatically matched to 3DC7 A:18-224
        complexed with mg, na, so4
        
        region b:18-224 [157533]
      3. 3dc7
        automatically matched to 3DC7 A:18-224
        complexed with mg, na, so4
        
        region c:18-224 [157534]
Beta-D-glucan exohydrolase, C-terminal domain [52279] (1)
uperfamily
1. Beta-D-glucan exohydrolase, C-terminal domain [52280] (1)
  1. Beta-D-glucan exohydrolase, C-terminal domain [52281]
    interdomain linker forms an additional, N-terminal strand
    1. Barley (Hordeum vulgare) [TaxId: 4513] [52282] (9)
      1. 1x38
        automatically matched to d1iexa2
        complexed with bma, fuc, gol, idd, man, nag, so4, xyp
        
        region a:389-602 [121656]
      2. 1x39
        automatically matched to d1iexa2
        complexed with bma, fuc, gol, ide, man, nag, so4, xyp
        
        region a:389-602 [121658]
      3. 1iex
        complexed with fuc, man, nag, tcb
        
        region a:389-603 [66128]
      4. 1ex1
        
        region a:389-602 [31347]
      5. 1j8v
        complexed with fuc, lam, man, nag
        
        region a:389-602 [71613]
      6. 1iew
        complexed with fuc, g2f, man, nag
        
        region a:389-602 [66126]
      7. 1ieq
        complexed with fuc, glc, man, nag
        
        region a:389-602 [66122]
      8. 1lq2
        complexed with fuc, gol, idd, man, nag
        
        region a:389-602 [91100]
      9. 1iev
        complexed with fuc, ins, man, nag
        
        region a:389-602 [66124]
Formate/glycerate dehydrogenase catalytic domain-like [52283] (3)
uperfamily
1. Formate/glycerate dehydrogenases, substrate-binding domain [52284] (9)
  this domain is interrupted by the Rossmann-fold domain
  1. Formate dehydrogenase [52285]
    contains an additional beta-hairpin after the common fold
    1. Pseudomonas sp., strain 101 [TaxId: 306] [52286] (2)
      1. 2nac
        complexed with so4
        
        region a:1-147,a:336-374 [31348]
        region b:1-147,b:336-374 [31349]
      2. 2nad
        complexed with azi, nad, so4
        
        region a:1-147,a:336-391 [31350]
        region b:1-147,b:336-383 [31351]
  2. Putative formate dehydrogenase [52287]
    1. Archaeon Pyrobaculum aerophilum [TaxId: 13773] [52288] (1)
      1. 1qp8
        complexed with ndp
        
        region a:1-82,a:264-302 [31352]
        region b:1-82,b:264-302 [31353]
  3. Transcription corepressor CtbP [82347]
    C-terminal binding protein 1; a dehydrogenase
    1. Human (Homo sapiens), Ctbp1 [TaxId: 9606] [82348] (1)
      1. 1mx3
        complexed with acy, nad
        
        region a:27-125,a:319-352 [79639]
    2. Rat (Rattus norvegicus), Ctbp3 [TaxId: 10116] [89597] (2)
      1. 1hku
        complexed with cea, fmt, gol, nad
        
        region a:15-114,a:308-346 [83558]
      2. 1hl3
        complexed with nad
        
        region a:15-114,a:308-346 [83586]
  4. D-2-hydroxyisocaproate dehydrogenase [52289]
    1. Lactobacillus casei [TaxId: 1582] [52290] (1)
      1. 1dxy
        complexed with coi, nad, so4
        
        region a:1-100,a:300-330 [31354]
  5. D-glycerate dehydrogenase [52291]
    1. Hyphomicrobium methylovorum [TaxId: 84] [52292] (1)
      1. 1gdh
        complexed with so4
        
        region a:2-100,a:292-321 [31355]
        region b:2-100,b:292-321 [31356]
  6. Phosphoglycerate dehydrogenase [52293]
    has additional C-terminal domain of the ferredoxin fold
    1. Escherichia coli [TaxId: 562] [52294] (18)
      1. 1sc6
        automatically matched to d1psda2
        complexed with nad; mutant
        
        region a:7-107,a:296-326 [118933]
      2. 1sc6
        automatically matched to d1psda2
        complexed with nad; mutant
        
        region b:7-107,b:296-326 [118936]
      3. 1sc6
        automatically matched to d1psda2
        complexed with nad; mutant
        
        region c:9-107,c:299-326 [118939]
      4. 1sc6
        automatically matched to d1psda2
        complexed with nad; mutant
        
        region d:7-107,d:296-326 [118942]
      5. 1yba
        automatically matched to d1psda2
        complexed with akg, nad, po4
        
        region a:7-107,a:296-326 [122873]
      6. 1yba
        automatically matched to d1psda2
        complexed with akg, nad, po4
        
        region b:7-107,b:296-326 [122876]
      7. 1yba
        automatically matched to d1psda2
        complexed with akg, nad, po4
        
        region c:7-107,c:296-326 [122879]
      8. 1yba
        automatically matched to d1psda2
        complexed with akg, nad, po4
        
        region d:7-107,d:296-326 [122882]
      9. 2p9c
        automatically matched to d1psda2
        complexed with nai, ser; mutant
        
        region a:7-107,a:296-326 [139557]
      10. 2p9c
        automatically matched to d1psda2
        complexed with nai, ser; mutant
        
        region b:7-107,b:296-326 [139560]
      11. 1psd
        complexed with nad
        
        region a:7-107,a:296-326 [31357]
        region b:7-107,b:296-326 [31358]
      12. 2p9e
        automatically matched to d1psda2
        complexed with cit, nai, po4, so4; mutant
        
        region a:7-107,a:296-326 [139563]
      13. 2p9e
        automatically matched to d1psda2
        complexed with cit, nai, po4, so4; mutant
        
        region b:7-107,b:296-326 [139566]
      14. 2p9e
        automatically matched to d1psda2
        complexed with cit, nai, po4, so4; mutant
        
        region c:7-107,c:296-326 [139569]
      15. 2p9e
        automatically matched to d1psda2
        complexed with cit, nai, po4, so4; mutant
        
        region d:8-107,d:296-326 [139572]
      16. 2p9g
        automatically matched to d1psda2
        complexed with nai, ser; mutant
        
        region a:7-107,a:296-326 [139575]
      17. 2p9g
        automatically matched to d1psda2
        complexed with nai, ser; mutant
        
        region b:7-107,b:296-326 [139578]
      18. 2pa3
        automatically matched to d1psda2
        complexed with nai, ser; mutant
        
        region a:7-107,a:296-326 [139639]
    2. Mycobacterium tuberculosis [TaxId: 1773] [142063] (2)
      SQ P0A544 2-97,282-315
      there is an intervening domain between this domain and regulatory (C-terminal) domain
      1. 1ygy
        complexed with tar
        
        region a:3-98,a:283-316 [123151]
      2. 1ygy
        automatically matched to 1YGY A:3-98,A:283-316
        complexed with tar
        
        region b:3-98,b:283-316 [123155]
  7. D-lactate dehydrogenase [52295]
    1. Lactobacillus helveticus [TaxId: 1587] [52296] (3)
      1. 1j4a
        complexed with sul; mutant
        
        region a:2-103,a:301-332 [71503]
        region b:2-103,b:301-332 [71505]
        region c:2-103,c:301-332 [71507]
        region d:2-103,d:301-333 [71509]
      2. 1j49
        complexed with nad, so4
        
        region a:1-103,a:301-332 [71499]
        region b:1-103,b:301-332 [71501]
      3. 2dld
        complexed with nad, oxm
        
        region a:1-103,a:301-337 [31359]
        region b:1-103,b:301-337 [31360]
2. L-alanine dehydrogenase-like [52297] (2)
  1. L-alanine dehydrogenase [52298]
    1. Phormidium lapideum [TaxId: 32060] [52299] (3)
      1. 1say
        complexed with pyr
        
        region a:1-135,a:304-361 [31362]
      2. 1pjc
        complexed with nad
        
        region a:1-135,a:304-361 [31361]
      3. 1pjb
        
        region a:1-135,a:304-361 [31363]
  2. Nicotinamide nucleotide transhydrogenase dI component [63963]
    L-alanine dehydrogenase homologue
    1. Rhodospirillum rubrum [TaxId: 1085] [63964] (28)
      1. 1l7d
        
        region a:1-143,a:327-377 [77775]
        region b:401-543,b:727-783 [77777]
        region c:801-943,c:1127-1178 [77779]
        region d:1201-1343,d:1527-1577 [77781]
      2. 1f8g
        complexed with nad
        
        region a:1-143,a:327-384 [59696]
        region b:1-143,b:327-384 [59698]
        region c:1-143,c:327-377 [59700]
        region d:1-143,d:327-380 [59702]
      3. 2fsv
        automatically matched to d1f8ga2
        complexed with gol, nad, nap; mutant
        
        region a:1-143,a:327-378 [134038]
      4. 2fsv
        automatically matched to d1f8ga2
        complexed with gol, nad, nap; mutant
        
        region b:1-143,b:327-378 [134040]
      5. 1l7e
        complexed with nai
        
        region a:1-143,a:327-378 [77783]
        region b:401-543,b:727-780 [77785]
        region c:801-943,c:1127-1179 [77787]
        region d:1201-1343,d:1527-1577 [77789]
      6. 1u2g
        automatically matched to d1f8ga2
        complexed with apr, gol, ndp
        
        region a:1-143,a:327-378 [119481]
      7. 1u2g
        automatically matched to d1f8ga2
        complexed with apr, gol, ndp
        
        region b:1-143,b:327-378 [119483]
      8. 2oor
        automatically matched to d1f8ga2
        complexed with gol, nad, txp
        
        region a:1-143,a:327-378 [139172]
      9. 2oor
        automatically matched to d1f8ga2
        complexed with gol, nad, txp
        
        region b:1-143,b:327-378 [139174]
      10. 1u28
        automatically matched to d1f8ga2
        complexed with gol, nad, nap
        
        region a:1-143,a:327-378 [119469]
      11. 1u28
        automatically matched to d1f8ga2
        complexed with gol, nad, nap
        
        region b:1-143,b:327-378 [119471]
      12. 2oo5
        automatically matched to d1f8ga2
        complexed with nap, so4, txd
        
        region a:1-143,a:327-378 [139163]
      13. 2oo5
        automatically matched to d1f8ga2
        complexed with nap, so4, txd
        
        region b:1-143,b:327-378 [139165]
      14. 2fr8
        automatically matched to d1f8ga2
        complexed with nad, nap; mutant
        
        region a:1-143,a:327-379 [133974]
      15. 2fr8
        automatically matched to d1f8ga2
        complexed with nad, nap; mutant
        
        region b:1-143,b:327-375 [133976]
      16. 1ptj
        complexed with dIII component
        complexed with gol, nap, snd
        
        region a:1-143,a:327-371 [95100]
        region b:1-143,b:327-381 [95102]
      17. 1nm5
        complexed with dIII component
        complexed with gol, nad, nap; mutant
        
        region a:1-143,a:327-374 [91969]
        region b:1-143,b:327-378 [91971]
      18. 1hzz
        complexed with dIII component
        complexed with nad, nap
        
        region a:1-143,a:327-371 [61471]
        region b:1-143,b:327-381 [61473]
      19. 1u2d
        automatically matched to d1f8ga2
        complexed with gol, nad, ndp
        
        region a:1-143,a:327-378 [119476]
      20. 1u2d
        automatically matched to d1f8ga2
        complexed with gol, nad, ndp
        
        region b:1-143,b:327-378 [119478]
      21. 2frd
        automatically matched to d1f8ga2
        complexed with nad, nap; mutant
        
        region a:1-143,a:327-370 [133981]
      22. 2frd
        automatically matched to d1f8ga2
        complexed with nad, nap; mutant
        
        region b:1-143,b:327-370 [133983]
      23. 1xlt
        automatically matched to d1f8ga2
        complexed with na, nad, ndp, suc
        
        region a:1-143,a:327-378 [122123]
      24. 1xlt
        automatically matched to d1f8ga2
        complexed with na, nad, ndp, suc
        
        region b:1-143,b:327-378 [122125]
      25. 1xlt
        automatically matched to d1f8ga2
        complexed with na, nad, ndp, suc
        
        region d:1-143,d:327-378 [122128]
      26. 1xlt
        automatically matched to d1f8ga2
        complexed with na, nad, ndp, suc
        
        region e:1-143,e:327-378 [122130]
      27. 1xlt
        automatically matched to d1f8ga2
        complexed with na, nad, ndp, suc
        
        region g:1-143,g:327-378 [122133]
      28. 1xlt
        automatically matched to d1f8ga2
        complexed with na, nad, ndp, suc
        
        region h:1-143,h:327-377 [122135]
3. S-adenosylhomocystein hydrolase [52300] (3)
  1. S-adenosylhomocystein hydrolase [52301]
    contains additional secondary structures disguising the superfamily fold
    1. Human (Homo sapiens) [TaxId: 9606] [52302] (2)
      1. 1li4
        complexed with ipa, nah, noc
        
        region a:3-189,a:353-432 [84617]
      2. 1a7a
        complexed with adc, nah
        
        region a:2-189,a:353-432 [31364]
        region b:3-189,b:353-432 [31365]
    2. Rat (Rattus norvegicus) [TaxId: 10116] [52303] (17)
      1. 1b3r
        complexed with nad; mutant
        
        region a:4-189,a:353-431 [31366]
        region b:4-189,b:353-431 [31367]
        region c:4-189,c:353-431 [31368]
        region d:4-189,d:353-431 [31369]
      2. 1k0u
        complexed with dea, nad
        
        region a:2-189,a:353-431 [67971]
        region b:2-189,b:353-431 [67973]
        region c:2-189,c:353-431 [67975]
        region d:2-189,d:353-431 [67977]
        region e:2-189,e:353-431 [67979]
        region f:2-189,f:353-431 [67981]
        region g:2-189,g:353-431 [67983]
        region h:2-189,h:353-431 [67985]
      3. 1ky5
        complexed with ady, nai; mutant
        
        region a:2-189,a:353-431 [77621]
        region b:1002-1189,b:1353-1431 [77623]
        region c:2002-2189,c:2353-2431 [77625]
        region d:3002-3189,d:3353-3431 [77627]
      4. 1ky4
        complexed with nad
        
        region a:4-189,a:353-431 [77613]
        region b:1004-1189,b:1353-1431 [77615]
        region c:2004-2189,c:2353-2431 [77617]
        region d:3004-3189,d:3353-3431 [77619]
      5. 1xwf
        automatically matched to d1d4fa2
        complexed with adn, nad; mutant
        
        region a:2-189,a:353-431 [122393]
      6. 1xwf
        automatically matched to d1d4fa2
        complexed with adn, nad; mutant
        
        region b:2-189,b:353-431 [122395]
      7. 1xwf
        automatically matched to d1d4fa2
        complexed with adn, nad; mutant
        
        region c:2-189,c:353-431 [122397]
      8. 1xwf
        automatically matched to d1d4fa2
        complexed with adn, nad; mutant
        
        region d:2-189,d:353-431 [122399]
      9. 1d4f
        complexed with adn, nad; mutant
        
        region a:2-189,a:353-431 [31370]
        region b:2-189,b:353-431 [31371]
        region c:2-189,c:353-431 [31372]
        region d:2-189,d:353-431 [31373]
      10. 2h5l
        automatically matched to d1d4fa2
        complexed with 3dd, nad
        
        region a:2-189,a:353-431 [136152]
      11. 2h5l
        automatically matched to d1d4fa2
        complexed with 3dd, nad
        
        region b:2-189,b:353-431 [136154]
      12. 2h5l
        automatically matched to d1d4fa2
        complexed with 3dd, nad
        
        region c:2-189,c:353-431 [136156]
      13. 2h5l
        automatically matched to d1d4fa2
        complexed with 3dd, nad
        
        region d:2-189,d:353-431 [136158]
      14. 2h5l
        automatically matched to d1d4fa2
        complexed with 3dd, nad
        
        region e:2-189,e:353-431 [136160]
      15. 2h5l
        automatically matched to d1d4fa2
        complexed with 3dd, nad
        
        region f:2-189,f:353-431 [136162]
      16. 2h5l
        automatically matched to d1d4fa2
        complexed with 3dd, nad
        
        region g:2-189,g:353-431 [136164]
      17. 2h5l
        automatically matched to d1d4fa2
        complexed with 3dd, nad
        
        region h:2-189,h:353-431 [136166]
    3. Plasmodium falciparum, isolate 3D7 [TaxId: 5833] [117480] (1)
      SQ P50250
      1. 1v8b
        complexed with adn, nah
        
        region a:4-234,a:398-479 [113565]
        region b:4-234,b:398-479 [113567]
        region c:4-234,c:398-479 [113569]
        region d:4-234,d:398-479 [113571]
Type II 3-dehydroquinate dehydratase [52304] (1)
uperfamily
1. Type II 3-dehydroquinate dehydratase [52305] (5)
  1. Type II 3-dehydroquinate dehydratase [52306]
    1. Mycobacterium tuberculosis [TaxId: 1773] [52307] (4)
      1. 1h05
        complexed with so4
        
        chain a [76433]
      2. 1h0s
        complexed with fa6, gol, so4
        
        chain a [83439]
      3. 2dhq
        
        chain a [31382]
      4. 1h0r
        complexed with cl, fa1, gol, po4
        
        chain a [90537]
    2. Streptomyces coelicolor [TaxId: 1902] [52308] (40)
      1. 1gtz
        complexed with dhk, trs; mutant
        
        chain a [70539]
        chain b [70540]
        chain c [70541]
        chain d [70542]
        chain e [70543]
        chain f [70544]
        chain g [70545]
        chain h [70546]
        chain i [70547]
        chain j [70548]
        chain k [70549]
        chain l [70550]
      2. 1gu1
        complexed with fa1, gol, tla, trs
        
        chain a [70563]
        chain b [70564]
        chain c [70565]
        chain d [70566]
        chain e [70567]
        chain f [70568]
        chain g [70569]
        chain h [70570]
        chain i [70571]
        chain j [70572]
        chain k [70573]
        chain l [70574]
      3. 2bt4
        automatically matched to d1d0ih_
        complexed with ca2, gol, po4, trs
        
        region a:2-150 [129140]
      4. 2bt4
        automatically matched to d1d0ih_
        complexed with ca2, gol, po4, trs
        
        region b:202-350 [129141]
      5. 2bt4
        automatically matched to d1d0ih_
        complexed with ca2, gol, po4, trs
        
        region c:402-550 [129142]
      6. 2bt4
        automatically matched to d1d0ih_
        complexed with ca2, gol, po4, trs
        
        region d:602-750 [129143]
      7. 2bt4
        automatically matched to d1d0ih_
        complexed with ca2, gol, po4, trs
        
        region e:802-950 [129144]
      8. 2bt4
        automatically matched to d1d0ih_
        complexed with ca2, gol, po4, trs
        
        region f:1002-1150 [129145]
      9. 2bt4
        automatically matched to d1d0ih_
        complexed with ca2, gol, po4, trs
        
        region g:1202-1350 [129146]
      10. 2bt4
        automatically matched to d1d0ih_
        complexed with ca2, gol, po4, trs
        
        region h:1402-1550 [129147]
      11. 2bt4
        automatically matched to d1d0ih_
        complexed with ca2, gol, po4, trs
        
        region i:1602-1750 [129148]
      12. 2bt4
        automatically matched to d1d0ih_
        complexed with ca2, gol, po4, trs
        
        region j:1802-1950 [129149]
      13. 2bt4
        automatically matched to d1d0ih_
        complexed with ca2, gol, po4, trs
        
        region k:2002-2150 [129150]
      14. 2bt4
        automatically matched to d1d0ih_
        complexed with ca2, gol, po4, trs
        
        region l:2202-2350 [129151]
      15. 1d0i
        complexed with po4, trs
        
        chain a [31383]
        chain b [31384]
        chain c [31385]
        chain d [31386]
        chain e [31387]
        chain f [31388]
        chain g [31389]
        chain h [31390]
        chain i [31391]
        chain j [31392]
        chain k [31393]
        chain l [31394]
      16. 1gu0
        complexed with trs
        
        chain a [70551]
        chain b [70552]
        chain c [70553]
        chain d [70554]
        chain e [70555]
        chain f [70556]
        chain g [70557]
        chain h [70558]
        chain i [70559]
        chain j [70560]
        chain k [70561]
        chain l [70562]
      17. 1v1j
        automatically matched to d1d0ih_
        complexed with fa3, trs
        
        region a:1-150 [119818]
      18. 1v1j
        automatically matched to d1d0ih_
        complexed with fa3, trs
        
        region b:1-150 [119819]
      19. 1v1j
        automatically matched to d1d0ih_
        complexed with fa3, trs
        
        region c:1-150 [119820]
      20. 1v1j
        automatically matched to d1d0ih_
        complexed with fa3, trs
        
        region d:1-150 [119821]
      21. 1v1j
        automatically matched to d1d0ih_
        complexed with fa3, trs
        
        region e:1-150 [119822]
      22. 1v1j
        automatically matched to d1d0ih_
        complexed with fa3, trs
        
        region f:1-150 [119823]
      23. 1v1j
        automatically matched to d1d0ih_
        complexed with fa3, trs
        
        region g:1-150 [119824]
      24. 1v1j
        automatically matched to d1d0ih_
        complexed with fa3, trs
        
        region h:1-150 [119825]
      25. 1v1j
        automatically matched to d1d0ih_
        complexed with fa3, trs
        
        region i:1-150 [119826]
      26. 1v1j
        automatically matched to d1d0ih_
        complexed with fa3, trs
        
        region j:1-150 [119827]
      27. 1v1j
        automatically matched to d1d0ih_
        complexed with fa3, trs
        
        region k:1-150 [119828]
      28. 1v1j
        automatically matched to d1d0ih_
        complexed with fa3, trs
        
        region l:1-150 [119829]
      29. 2cjf
        automatically matched to d1d0ih_
        complexed with gol, po4, rp4, trs
        
        region a:2-150 [130526]
      30. 2cjf
        automatically matched to d1d0ih_
        complexed with gol, po4, rp4, trs
        
        region b:202-350 [130527]
      31. 2cjf
        automatically matched to d1d0ih_
        complexed with gol, po4, rp4, trs
        
        region c:402-550 [130528]
      32. 2cjf
        automatically matched to d1d0ih_
        complexed with gol, po4, rp4, trs
        
        region d:602-750 [130529]
      33. 2cjf
        automatically matched to d1d0ih_
        complexed with gol, po4, rp4, trs
        
        region e:802-950 [130530]
      34. 2cjf
        automatically matched to d1d0ih_
        complexed with gol, po4, rp4, trs
        
        region f:1002-1150 [130531]
      35. 2cjf
        automatically matched to d1d0ih_
        complexed with gol, po4, rp4, trs
        
        region g:1202-1350 [130532]
      36. 2cjf
        automatically matched to d1d0ih_
        complexed with gol, po4, rp4, trs
        
        region h:1402-1550 [130533]
      37. 2cjf
        automatically matched to d1d0ih_
        complexed with gol, po4, rp4, trs
        
        region i:1602-1750 [130534]
      38. 2cjf
        automatically matched to d1d0ih_
        complexed with gol, po4, rp4, trs
        
        region j:1802-1950 [130535]
      39. 2cjf
        automatically matched to d1d0ih_
        complexed with gol, po4, rp4, trs
        
        region k:2002-2150 [130536]
      40. 2cjf
        automatically matched to d1d0ih_
        complexed with gol, po4, rp4, trs
        
        region l:2202-2350 [130537]
    3. Bacillus subtilis [TaxId: 1423] [82349] (1)
      1. 1gqo
        complexed with gol
        
        chain a [76295]
        chain b [76296]
        chain c [76297]
        chain d [76298]
        chain e [76299]
        chain f [76300]
        chain g [76301]
        chain h [76302]
        chain i [76303]
        chain j [76304]
        chain k [76305]
        chain l [76306]
        chain m [76307]
        chain n [76308]
        chain o [76309]
        chain p [76310]
        chain q [76311]
        chain r [76312]
        chain s [76313]
        chain t [76314]
        chain u [76315]
        chain v [76316]
        chain x [76317]
        chain y [76318]
    4. Helicobacter pylori [TaxId: 210] [89598] (14)
      1. 2c4v
        automatically matched to d1j2ya_
        complexed with cit
        
        region a:1-158 [129863]
      2. 1j2y
        complexed with dqa
        
        chain a [84047]
      3. 2c57
        automatically matched to d1j2ya_
        complexed with fa1
        
        region a:1-158 [129879]
      4. 2c57
        automatically matched to d1j2ya_
        complexed with fa1
        
        region b:1-158 [129880]
      5. 2c57
        automatically matched to d1j2ya_
        complexed with fa1
        
        region c:1-158 [129881]
      6. 2c57
        automatically matched to d1j2ya_
        complexed with fa1
        
        region d:1-158 [129882]
      7. 2c57
        automatically matched to d1j2ya_
        complexed with fa1
        
        region e:1-158 [129883]
      8. 2c57
        automatically matched to d1j2ya_
        complexed with fa1
        
        region f:1-158 [129884]
      9. 2c57
        automatically matched to d1j2ya_
        complexed with fa1
        
        region g:1-158 [129885]
      10. 2c57
        automatically matched to d1j2ya_
        complexed with fa1
        
        region h:1-158 [129886]
      11. 2c57
        automatically matched to d1j2ya_
        complexed with fa1
        
        region i:1-158 [129887]
      12. 2c57
        automatically matched to d1j2ya_
        complexed with fa1
        
        region j:1-158 [129888]
      13. 2c57
        automatically matched to d1j2ya_
        complexed with fa1
        
        region k:1-158 [129889]
      14. 2c57
        automatically matched to d1j2ya_
        complexed with fa1
        
        region l:1-158 [129890]
    5. Actinobacillus pleuropneumoniae [TaxId: 715] [102243] (1)
      1. 1uqr
        complexed with so4, trs
        
        chain a [99779]
        chain b [99780]
        chain c [99781]
        chain d [99782]
        chain e [99783]
        chain f [99784]
        chain g [99785]
        chain h [99786]
        chain i [99787]
        chain j [99788]
        chain k [99789]
        chain l [99790]
N-(deoxy)ribosyltransferase-like [52309] (3)
there are similar active site architectures as well as the catalytic mechanisms of functionally characterised members
uperfamily
1. N-deoxyribosyltransferase [52310] (3)
  1. Nucleoside 2-deoxyribosyltransferase [52311]
    class II N-deoxyribosyltransferase
    1. Lactobacillus leichmannii [TaxId: 28039] [52312] (2)
      1. 1f8y
        complexed with 5-methyl-2'-deoxypseudouridine
        complexed with 5md
        
        chain a [31395]
        chain b [31396]
      2. 1f8x
        
        chain a [31397]
        chain b [31398]
    2. Trypanosoma brucei [TaxId: 5691] [142064] (10)
      SQ Q57VC7 1-152
      1. 2f62
        automatically matched to 2A0K A:9-160
        complexed with 12m, gol, so4
        
        region a:9-160 [133021]
      2. 2f62
        automatically matched to 2A0K A:9-160
        complexed with 12m, gol, so4
        
        region b:9-160 [133022]
      3. 2f64
        automatically matched to 2A0K A:9-160
        complexed with 12q, gol, so4
        
        region a:9-160 [133024]
      4. 2f64
        automatically matched to 2A0K A:9-160
        complexed with 12q, gol, so4
        
        region b:9-160 [133025]
      5. 2f67
        automatically matched to 2A0K A:9-160
        complexed with 12b, gol, so4
        
        region a:9-160 [133033]
      6. 2f67
        automatically matched to 2A0K A:9-160
        complexed with 12b, gol, so4
        
        region b:9-160 [133034]
      7. 2f2t
        automatically matched to 2A0K A:9-160
        complexed with 5iq, gol, so4; mutant
        
        region a:9-160 [132847]
      8. 2f2t
        automatically matched to 2A0K A:9-160
        complexed with 5iq, gol, so4; mutant
        
        region b:9-160 [132848]
      9. 2a0k
        complexed with gol, so4
        
        region a:9-160 [125954]
      10. 2a0k
        automatically matched to 2A0K A:9-160
        complexed with gol, so4
        
        region b:9-160 [125955]
  2. Purine transdeoxyribosylase [102244]
    class I N-deoxyribosyltransferase
    1. Lactobacillus helveticus [TaxId: 1587] [102245] (5)
      1. 1s2d
        complexed with ade, ar4
        
        chain a [98377]
        chain b [98378]
        chain c [98379]
      2. 1s2l
        
        chain a [98390]
        chain b [98391]
        chain c [98392]
      3. 1s2g
        complexed with 3d1
        
        chain a [98382]
        chain b [98383]
        chain c [98384]
      4. 1s2i
        complexed with bp1
        
        chain a [98386]
        chain b [98387]
        chain c [98388]
      5. 1s3f
        complexed with sni
        
        chain a [98430]
        chain b [98431]
        chain c [98432]
2. Hypothetical protein PA1492 [110461] (1)
  lacks the last strand; monomer; predicted deoxyribosyltransferase activity
  1. Hypothetical protein PA1492 [110462]
    1. Pseudomonas aeruginosa [TaxId: 287] [110463] (1)
      SQ Q9I3M0
      1. 1t1j
        Structural genomics target
        
        chain a [106249]
        chain b [106250]
3. ADP ribosyl cyclase-like [56630] (3)
  contains extra N-terminal all-alpha subdomain
  1. ADP ribosyl cyclase [56631]
    1. California sea hare (Aplysia californica) [TaxId: 6500] [56632] (5)
      1. 1r12
        
        chain a [96780]
        chain b [96781]
      2. 1r16
        complexed with pyf, rob
        
        chain a [96794]
        chain b [96795]
      3. 1r0s
        mutant
        
        chain a [96737]
        chain b [96738]
      4. 1r15
        complexed with nca, rob
        
        chain a [96786]
        chain b [96787]
        chain c [96788]
        chain d [96789]
        chain e [96790]
        chain f [96791]
        chain g [96792]
        chain h [96793]
      5. 1lbe
        
        chain a [42773]
        chain b [42774]
    2. Human (Homo sapiens) [TaxId: 9606] [159490] (2)
      SQ P28907 45-291
      1. 2ef1
        complexed with epe
        
        region a:45-291 [146807]
      2. 2ef1
        automatically matched to 2EF1 A:45-291
        complexed with epe
        
        region b:45-289 [146808]
  2. Bone marror stromal cell antigen 1, BST-1/CD157 (ADP ribosyl cyclase-2) [75597]
    1. Human (Homo sapiens) [TaxId: 9606] [75598] (6)
      1. 1isi
        complexed with ena, nag, nca; mutant
        
        chain a [71394]
        chain b [71395]
      2. 1isj
        complexed with nag, nmn; mutant
        
        chain a [71396]
        chain b [71397]
      3. 1ish
        complexed with enp, nag; mutant
        
        chain a [71392]
        chain b [71393]
      4. 1isf
        complexed with gol, nag; mutant
        
        chain a [71388]
        chain b [71389]
      5. 1isg
        complexed with nag, sap; mutant
        
        chain a [71390]
        chain b [71391]
      6. 1ism
        complexed with nag, nca; mutant
        
        chain a [71398]
        chain b [71399]
Ribosomal protein S2 [52313] (1)
fold elaborated with additional structures
uperfamily
1. Ribosomal protein S2 [52314] (3)
  1. Ribosomal protein S2 [52315]
    1. Thermus thermophilus [TaxId: 274] [52316] (46)
      SQ P80371
      1. 2uub
        automatically matched to d1i94b_
        complexed with 6mz, cm0, k, mg, par, zn
        
        region b:7-240 [139932]
      2. 2vqe
        automatically matched to d1i94b_
        complexed with k, mg, par, tm2, zn
        
        region b:7-241 [153427]
      3. 1fjg
        complexed with mg, par, scm, sry, zn
        
        chain b [31400]
      4. 2vqf
        automatically matched to d1i94b_
        complexed with k, mg, par, tm2, zn
        
        region b:7-241 [153446]
      5. 1j5e
        complexed with unx, zn
        
        chain b [71543]
      6. 2uxc
        automatically matched to d1i94b_
        complexed with k, mg, par, zn
        
        region b:7-240 [140003]
      7. 2uuc
        automatically matched to d1i94b_
        complexed with 6mz, cm0, k, mg, par, zn
        
        region b:7-240 [139952]
      8. 2uua
        automatically matched to d1i94b_
        complexed with 6mz, cm0, k, mg, par, zn
        
        region b:7-240 [139912]
      9. 1xmq
        complexed with mg, par, t6a, zn
        
        chain b [115529]
      10. 1n32
        complexed with mg, par, psu, zn
        
        chain b [79869]
      11. 2uu9
        automatically matched to d1i94b_
        complexed with 6mz, cm0, k, mg, par, zn
        
        region b:7-240 [139892]
      12. 1xnq
        complexed with mg, par, zn
        
        chain b [115603]
      13. 1xnr
        complexed with mg, par, zn
        
        chain b [115625]
      14. 1hr0
        complexed with mg, zn
        
        chain b [31401]
      15. 1hnz
        complexed with hyg, mg, zn
        
        chain b [31402]
      16. 2j02
        automatically matched to d1i94b_
        complexed with 5mu, mg, par, zn
        
        region b:7-241 [137865]
      17. 2j00
        automatically matched to d1i94b_
        complexed with 5mu, mg, par, zn
        
        region b:7-241 [137838]
      18. 2uxd
        automatically matched to d1i94b_
        complexed with k, mg, par, zn
        
        region b:7-241 [152283]
      19. 1xmo
        complexed with mg, mnu, par, t6a, zn
        
        chain b [115499]
      20. 1hnw
        complexed with mg, tac, zn
        
        chain b [31403]
      21. 3d5a
        automatically matched to d1i94b_
        complexed with mg, zn
        
        region b:7-240 [157337]
      22. 3d5c
        automatically matched to d1i94b_
        complexed with mg, zn
        
        region b:7-240 [157367]
      23. 1i94
        complexed with mg, wo2, zn
        
        chain b [61991]
      24. 1hnx
        complexed with mg, pcy, zn
        
        chain b [31404]
      25. 1n33
        complexed with mg, par, psu, zn
        
        chain b [79891]
      26. 2hhh
        automatically matched to d1i94b_
        complexed with ksg
        
        region b:7-240 [136476]
      27. 1i96
        complexed with mg, wo2, zn
        
        chain b [62035]
      28. 2uxb
        automatically matched to d1i94b_
        complexed with k, mg, par, zn
        
        region b:7-241 [152264]
      29. 1n34
        complexed with zn
        
        chain b [79913]
      30. 2v46
        automatically matched to d1i94b_
        complexed with 5mu, mg, zn
        
        region b:7-241 [152485]
      31. 2v48
        automatically matched to d1i94b_
        complexed with 5mu, mg, zn
        
        region b:7-241 [152521]
      32. 1i97
        complexed with mg, tac, wo2, zn
        
        chain b [62058]
      33. 1n36
        complexed with zn
        
        chain b [79936]
      34. 1i95
        complexed with ede, mg, wo2, zn
        
        chain b [62013]
      35. 2om7
        automatically matched to d1i94b_
        complexed with 4su, 5mc, 5mu, h2u, psu
        
        region n:7-241 [148868]
      36. 2f4v
        automatically matched to d1i94b_
        complexed with ab9, d2c, k, mg, zn
        
        region b:7-243 [132937]
      37. 2qnh
        automatically matched to d1i94b_
        complexed with 2mg, 5mc, 7mg, m2g, ma6, psu
        
        region c:7-240 [150927]
      38. 2hgp
        automatically matched to d1i94b_
        
        region e:7-240 [136420]
      39. 2hgi
        automatically matched to d1i94b_
        
        region e:7-240 [136399]
      40. 2hgr
        automatically matched to d1i94b_
        
        region e:7-240 [136441]
      41. 2ow8
        automatically matched to d1i94b_
        complexed with 2mg, 4oc, 4su, 5mc, 5mu, 7mg, h2u, m2g, ma6, mia, psu, ur3
        
        region c:7-240 [139398]
      42. 1x18
        automatically matched to d1i94b_
        complexed with du
        
        region e:7-240 [121573]
      43. 1yl4
        automatically matched to d1i94b_
        
        region e:7-240 [123596]
      44. 2b64
        automatically matched to d1i94b_
        complexed with psu, yyg
        
        region b:7-240 [127932]
      45. 2b9o
        automatically matched to d1i94b_
        complexed with psu, yyg
        
        region b:7-240 [128162]
      46. 2b9m
        automatically matched to d1i94b_
        complexed with psu, yyg
        
        region b:7-240 [128125]
    2. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [102246] (2)
      1. 1vi6
        structural genomics
        complexed with na
        
        chain a [100736]
        chain b [100737]
        chain c [100738]
        chain d [100739]
      2. 1vi5
        structural genomics
        
        chain a [100732]
        chain b [100733]
        chain c [100734]
        chain d [100735]
    3. Escherichia coli [TaxId: 562] [159491] (26)
      SQ P0A7V0 8-225
      1. 2gy9
        automatically matched to 2AVY B:8-225
        
        region b:8-225 [145232]
      2. 2gyb
        automatically matched to 2AVY B:8-225
        
        region b:8-225 [145254]
      3. 2qal
        automatically matched to 2AVY B:8-225
        complexed with mg, nmy
        
        region b:8-225 [150213]
      4. 2qan
        automatically matched to 2AVY B:8-225
        complexed with mg, nmy
        
        region b:8-225 [150267]
      5. 2qbf
        automatically matched to 2AVY B:8-225
        complexed with mg
        
        region b:8-225 [150487]
      6. 2qbd
        automatically matched to 2AVY B:8-225
        complexed with mg
        
        region b:8-225 [150433]
      7. 1vs5
        automatically matched to 2AVY B:8-225
        complexed with ksg, mg
        
        region b:8-225 [144435]
      8. 3df1
        automatically matched to 2AVY B:8-225
        complexed with hyg, mg
        
        region b:8-225 [157602]
      9. 3df3
        automatically matched to 2AVY B:8-225
        complexed with hyg, mg
        
        region b:8-225 [157656]
      10. 1vs7
        automatically matched to 2AVY B:8-225
        complexed with ksg, mg
        
        region b:8-225 [144476]
      11. 2qoy
        automatically matched to 2AVY B:8-225
        complexed with mg, nmy, scm
        
        region b:8-225 [151090]
      12. 2qp0
        automatically matched to 2AVY B:8-225
        complexed with mg, nmy, scm
        
        region b:8-225 [151143]
      13. 2avy
        Representative structure
        complexed with mg
        
        region b:8-225 [144842]
      14. 2aw7
        automatically matched to 2AVY B:8-225
        complexed with mg
        
        region b:8-225 [144885]
      15. 2qb9
        automatically matched to 2AVY B:8-225
        complexed with lll, mg
        
        region b:8-225 [150327]
      16. 2qbb
        automatically matched to 2AVY B:8-225
        complexed with lll, mg
        
        region b:8-225 [150380]
      17. 2i2p
        automatically matched to 2AVY B:8-225
        complexed with mg
        
        region b:8-225 [145420]
      18. 2i2u
        automatically matched to 2AVY B:8-225
        complexed with mg
        
        region b:8-225 [145462]
      19. 2qbh
        automatically matched to 2AVY B:8-225
        complexed with lll, mg
        
        region b:8-225 [150541]
      20. 2qbj
        automatically matched to 2AVY B:8-225
        complexed with lll, mg
        
        region b:8-225 [150595]
      21. 2qou
        automatically matched to 2AVY B:8-225
        complexed with mg, scm
        
        region b:8-225 [150984]
      22. 2qow
        automatically matched to 2AVY B:8-225
        complexed with mg, scm
        
        region b:8-225 [151037]
      23. 2z4m
        automatically matched to 2AVY B:8-225
        complexed with mg, par
        
        region b:8-225 [154105]
      24. 2vho
        automatically matched to 2AVY B:8-225
        complexed with mg
        
        region b:8-225 [153122]
      25. 2z4k
        automatically matched to 2AVY B:8-225
        complexed with mg, par
        
        region b:8-225 [154051]
      26. 2vhp
        automatically matched to 2AVY B:8-225
        complexed with mg
        
        region b:8-225 [153144]
Precorrin-8X methylmutase CbiC/CobH [63965] (1)
fold elaborated with additional structures
uperfamily
1. Precorrin-8X methylmutase CbiC/CobH [63966] (3)
  1. Precorrin-8x methylmutase [63967]
    1. Pseudomonas denitrificans [TaxId: 43306] [63968] (2)
      1. 1f2v
        mutant
        
        chain a [59627]
      2. 1i1h
        complexed with coj; mutant
        
        chain a [61530]
    2. Thermus thermophilus [TaxId: 274] [102247] (1)
      1. 1v9c
        complexed with cl, so4
        
        chain a [100533]
        chain b [100534]
  2. Precorrin-8x methylmutase related protein [102248]
    1. Archaeon Thermoplasma acidophilum [TaxId: 2303] [102249] (1)
      1. 1ou0
        structural genomics
        
        chain a [93536]
        chain b [93537]
        chain c [93538]
        chain d [93539]
Class I glutamine amidotransferase-like [52317] (9)
conserved positions of the oxyanion hole and catalytic nucleophile; different constituent families contain different additional structures
uperfamily
1. Class I glutamine amidotransferases (GAT) [52318] (18)
  contains a catalytic Cys-His-Glu triad
  1. GMP synthetase [52319]
    1. Escherichia coli [TaxId: 562] [52320] (1)
      1. 1gpm
        complexed with amp, cit, mg, po4, pop
        
        region a:3-207 [31405]
        region b:3-207 [31406]
        region c:3-207 [31407]
        region d:3-207 [31408]
  2. Carbamoyl phosphate synthetase, small subunit C-terminal domain [52321]
    1. Escherichia coli [TaxId: 562] [52322] (10)
      SQ P00907
      1. 1a9x
        complexed with adp, cl, k, mn, net, orn, po4; mutant
        
        region b:1653-1880 [31409]
        region d:3653-3880 [31410]
        region f:5653-5880 [31411]
        region h:7653-7880 [31412]
      2. 1c30
        
        region b:153-380 [31413]
        region d:153-380 [31414]
        region f:153-380 [31415]
        region h:153-380 [31416]
      3. 1cs0
        
        region b:153-380 [31417]
        region d:153-380 [31418]
        region f:153-380 [31419]
        region h:153-380 [31420]
      4. 1t36
        complexed with adp, cl, k, mn, net, orn, po4, u; mutant
        
        region b:153-380 [106308]
        region d:153-380 [106316]
        region f:153-380 [106324]
        region h:153-380 [106332]
      5. 1jdb
        complexed with adp, cl, e4n, k, mn, orn, po4
        
        region c:153-380 [31433]
        region f:153-381 [31434]
        region i:153-380 [31435]
        region l:153-380 [31436]
      6. 1kee
        complexed with 143, adp, cl, k, mn, net, orn, pi
        
        region b:153-380 [68499]
        region d:153-380 [68507]
        region f:153-380 [68515]
        region h:153-380 [68523]
      7. 1m6v
        complexed with adp, cl, k, mn, net, orn, pi; mutant
        
        region b:153-380 [74543]
        region d:153-380 [74551]
        region f:153-380 [74559]
        region h:153-380 [74567]
      8. 1c3o
        
        region b:153-380 [31421]
        region d:153-380 [31422]
        region f:153-380 [31423]
        region h:153-380 [31424]
      9. 1ce8
        complexed with adp, cl, imp, k, mn, net, orn, pi
        
        region b:153-380 [31425]
        region d:153-380 [31426]
        region f:153-380 [31427]
        region h:153-380 [31428]
      10. 1bxr
        complexed with anp, cl, k, mn, net, orn
        
        region b:153-380 [31429]
        region d:153-380 [31430]
        region f:153-380 [31431]
        region h:153-380 [31432]
  3. Anthranilate synthase GAT subunit, TrpG [52323]
    1. Archaeon Sulfolobus solfataricus [TaxId: 2287] [52324] (1)
      1. 1qdl
        
        chain b [31437]
    2. Salmonella typhimurium [TaxId: 90371] [63969] (1)
      1. 1i1q
        complexed with trp
        
        chain b [61544]
    3. Serratia marcescens [TaxId: 615] [63970] (2)
      1. 1i7q
        complexed with bez, ilg, mg, pyr
        
        chain b [61902]
        chain d [61904]
      2. 1i7s
        complexed with trp
        
        chain b [61906]
        chain d [61908]
  4. GAT subunit, HisH, (or domain) of imidazoleglycerolphosphate synthase HisF [69447]
    1. Thermotoga maritima [TaxId: 2336] [69448] (3)
      1. 1k9v
        complexed with acy
        
        chain f [68365]
      2. 1gpw
        complexed with po4; mutant
        
        chain b [65461]
        chain d [65463]
        chain f [65465]
      3. 1kxj
        complexed with po4
        
        chain a [73153]
        chain b [73154]
    2. Thermus thermophilus [TaxId: 274] [82350] (1)
      1. 1ka9
        
        chain h [77308]
    3. Baker's yeast (Saccharomyces cerevisiae), His7 [TaxId: 4932] [69449] (4)
      1. 1jvn
        complexed with 143, ni, pop, so4
        
        region a:-3-229 [67356]
        region b:-3-229 [67358]
      2. 1ox6
        complexed with ni, pop, so4
        
        region a:-3-229 [87506]
        region b:-3-229 [87508]
      3. 1ox5
        complexed with 1pr, 5cs, ni; mutant
        
        region a:-3-229 [87502]
        region b:3-229 [87504]
      4. 1ox4
        complexed with cyd, ni, pop, so4
        
        region a:-3-229 [87498]
        region b:-3-229 [87500]
  5. gamma-glutamyl hydrolase [75154]
    1. Human (Homo sapiens) [TaxId: 9606] [75155] (1)
      1. 1l9x
        complexed with bme
        
        chain a [73762]
        chain b [73763]
        chain c [73764]
        chain d [73765]
  6. Hypothetical protein TM1158 [89599]
    1. Thermotoga maritima [TaxId: 2336] [89600] (1)
      1. 1o1y
        structural genomics
        complexed with mse, ocs, so4
        
        chain a [86554]
  7. Hypothetical protein YaaE [102250]
    glutamine amidotransferase of SNO/PDX2 family implicated in pyridoxine biosynthesis
    1. Bacillus subtilis [TaxId: 1423] [102251] (3)
      1. 2nv0
        automatically matched to d1r9ga_
        
        region a:1-195 [138625]
      2. 2nv0
        automatically matched to d1r9ga_
        
        region b:1-194 [138626]
      3. 1r9g
        
        chain a [97258]
        chain b [97259]
    2. Bacillus stearothermophilus [TaxId: 1422] [102252] (1)
      1. 1q7r
        structural genomics
        complexed with cl, edo, so4
        
        chain a [96054]
  8. CTP synthase PyrG, C-terminal domain [110481]
    1. Escherichia coli [TaxId: 562] [110482] (1)
      SQ P08398
      1. 1s1m
        complexed with iod, mg, mpd, so4
        
        region a:287-544 [105201]
        region b:287-545 [105203]
    2. Thermus thermophilus [TaxId: 274] [110483] (3)
      SQ Q5SIA8
      1. 1vco
        complexed with gln
        
        region a:298-547 [108508]
      2. 1vcm
        
        region a:298-547 [108504]
      3. 1vcn
        complexed with so4
        
        region a:298-547 [108506]
  9. FGAM synthase PurL, amidotransferase domain [110484]
    1. Salmonella typhimurium [TaxId: 90371] [110485] (1)
      SQ P74881
      1. 1t3t
        complexed with adp, mg, so4
        
        region a:1034-1295 [106382]
  10. GMP synthase subunit A, GuaAA [142065]
    1. Archaeon Thermoplasma acidophilum [TaxId: 2303] [142066] (4)
      SQ Q9HJM3 1-196
      1. 2a9v
        complexed with cl, gol, scn
        
        region a:1-196 [126452]
      2. 2a9v
        automatically matched to 2A9V A:1-196
        complexed with cl, gol, scn
        
        region b:1-196 [126453]
      3. 2a9v
        automatically matched to 2A9V A:1-196
        complexed with cl, gol, scn
        
        region c:1-196 [126454]
      4. 2a9v
        automatically matched to 2A9V A:1-196
        complexed with cl, gol, scn
        
        region d:1-196 [126455]
    2. Archaeon Pyrococcus horikoshii [TaxId: 53953] [142067] (1)
      SQ O59071 1-188
      1. 1wl8
        complexed with acy, cl, snn
        
        region a:1-188 [120997]
  11. Pyridoxine biosynthesis protein 2, Pdx2 [142068]
    1. Malaria parasite (Plasmodium falciparum) [TaxId: 5833] [142069] (2)
      SQ Q5ND68 2-219
      1. 2abw
        complexed with pg4
        
        region a:2-219 [126535]
      2. 2abw
        automatically matched to 2ABW A:2-219
        complexed with pg4
        
        region b:2-219 [126536]
2. A4 beta-galactosidase middle domain [82351] (1)
  probable non-catalytic branch of the class I GAT family; overall fold is very similar but the active site is not conserved
  1. A4 beta-galactosidase middle domain [82352]
    1. Thermus thermophilus [TaxId: 274] [82353] (2)
      1. 1kwg
        complexed with act, cl, mpd, zn
        
        region a:394-590 [77563]
      2. 1kwk
        complexed with act, cl, gal, mpd, zn
        
        region a:394-590 [77567]
3. DJ-1/PfpI [52325] (9)
  contains a catalytic triad or dyad different from the class I GAT triad
  1. Intracellular protease [52326]
    1. Archaeon Pyrococcus horikoshii [TaxId: 53953] [52327] (1)
      1. 1g2i
        complexed with so4
        
        chain a [31438]
        chain b [31439]
        chain c [31440]
  2. Hypothetical protein YhbO [89601]
    1. Escherichia coli [TaxId: 562] [89602] (1)
      1. 1oi4
        structural genomics
        
        region a:23-192 [144364]
        region b:223-392 [144365]
  3. DJ-1 [89603]
    RNA-binding protein regulatory subunit
    1. Human (Homo sapiens) [TaxId: 9606] [89604] (20)
      SQ Q99497
      1. 1p5f
        
        chain a [94142]
      2. 1soa
        
        chain a [105843]
      3. 2or3
        automatically matched to d1pdwg_
        complexed with so4
        
        region a:2-188 [139256]
      4. 2or3
        automatically matched to d1pdwg_
        complexed with so4
        
        region b:2-188 [139257]
      5. 2r1u
        automatically matched to d1pdwg_
        
        region a:2-188 [151527]
      6. 2r1u
        automatically matched to d1pdwg_
        
        region b:2-188 [151528]
      7. 1q2u
        
        chain a [95642]
      8. 1ps4
        
        chain a [95068]
      9. 1pe0
        mutant
        
        chain a [88045]
        chain b [88046]
      10. 1pdv
        complexed with mse
        
        chain a [88036]
      11. 1ucf
        
        chain a [99173]
        chain b [99174]
      12. 1pdw
        complexed with mse
        
        chain a [88037]
        chain b [88038]
        chain c [88039]
        chain d [88040]
        chain e [88041]
        chain f [88042]
        chain g [88043]
        chain h [88044]
      13. 1j42
        
        chain a [90837]
      14. 3bwe
        automatically matched to d1pdwg_
        complexed with po4
        
        region a:2-188 [155686]
      15. 3bwe
        automatically matched to d1pdwg_
        complexed with po4
        
        region b:202-388 [155687]
      16. 3bwe
        automatically matched to d1pdwg_
        complexed with po4
        
        region c:402-588 [155688]
      17. 3bwe
        automatically matched to d1pdwg_
        complexed with po4
        
        region d:603-788 [155689]
      18. 3bwe
        automatically matched to d1pdwg_
        complexed with po4
        
        region e:802-988 [155690]
      19. 3bwe
        automatically matched to d1pdwg_
        complexed with po4
        
        region f:1003-1188 [155691]
      20. 3bwe
        automatically matched to d1pdwg_
        complexed with po4
        
        region g:1203-1388 [155692]
  4. Putative sigma cross-reacting protein 27A (SCRP-27A, EllB) [89606]
    involved in an early stage of isoprenoid biosynthesis; contains a Cys-Glu putative catalytic dyad
    1. Escherichia coli [TaxId: 562] [89607] (2)
      1. 1vhq
        structural genomics
        complexed with act
        
        chain a [100696]
        chain b [100697]
      2. 1oy1
        structural genomics; NESG target ER105
        complexed with mse
        
        chain a [87548]
        chain b [87549]
        chain c [87550]
        chain d [87551]
  5. HSP31 (HchA; YedU) [89609]
    contains a buried Cys-His-Asp triad within one subunit
    1. Escherichia coli [TaxId: 562] [89610] (5)
      1. 1n57
        complexed with mg, mse
        
        chain a [85328]
      2. 1ons
        complexed with zn2
        
        chain a [93371]
      3. 1izz
        
        chain a [90731]
      4. 1izy
        
        chain a [90729]
        chain b [90730]
      5. 1pv2
        
        chain a [95142]
        chain b [95143]
        chain c [95144]
        chain d [95145]
        chain e [95146]
        chain f [95147]
        chain g [95148]
        chain h [95149]
  6. Hypothetical protein Ydr533Cp [102253]
    contains a buried Cys-His-Glu triad within one subunit
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [102254] (4)
      1. 1qvz
        structural genomics
        mutant
        
        chain a [96453]
        chain b [96454]
      2. 1qvw
        structural genomics
        complexed with gol; mutant
        
        chain a [96446]
        chain b [96447]
      3. 1rw7
        
        chain a [97963]
      4. 1qvv
        structural genomics
        
        chain a [96442]
        chain b [96443]
        chain c [96444]
        chain d [96445]
  7. GK2698 ortholog [117481]
    1. Bacillus stearothermophilus [TaxId: 1422] [117482] (1)
      SQ Q5KWF3; 96% sequence identity; Geobacillus kaustophilus TaxID: 1462
      1. 1u9c
        Structural genomics target; APC35852
        
        chain a [113234]
  8. Protein ThiJ (YajL) [142070]
    1. Escherichia coli [TaxId: 562] [142071] (2)
      SQ Q46948 2-196
      1. 2ab0
        
        region a:2-196 [126501]
      2. 2ab0
        automatically matched to 2AB0 A:2-196
        
        region b:2-196 [126502]
  9. Hypothetical protein Atu0886 [142072]
    1. Agrobacterium tumefaciens [TaxId: 358] [142073] (3)
      SQ Q8UGZ9 1-188
      1. 2fex
        complexed with gol, so4
        
        region a:1-188 [133354]
      2. 2fex
        automatically matched to 2FEX A:1-188
        complexed with gol, so4
        
        region b:1-188 [133355]
      3. 2fex
        automatically matched to 2FEX A:1-188
        complexed with gol, so4
        
        region c:1-188 [133356]
4. Catalase, C-terminal domain [52328] (2)
  1. Catalase, C-terminal domain [52329]
    1. Escherichia coli, HPII [TaxId: 562] [52330] (14)
      1. 1p80
        complexed with hem; mutant
        
        region a:598-753 [94337]
        region b:598-753 [94339]
        region c:598-753 [94341]
        region d:598-753 [94343]
      2. 1p81
        complexed with hdd; mutant
        
        region a:598-753 [94345]
        region b:598-753 [94347]
        region c:598-753 [94349]
        region d:598-753 [94351]
      3. 1gge
        complexed with hdd
        
        region a:598-753 [31449]
        region b:598-753 [31450]
        region c:598-753 [31451]
        region d:598-753 [31452]
      4. 1gg9
        complexed with hem; mutant
        
        region a:598-753 [31445]
        region b:598-753 [31446]
        region c:598-753 [31447]
        region d:598-753 [31448]
      5. 1cf9
        complexed with hem; mutant
        
        region a:598-753 [31441]
        region b:598-753 [31442]
        region c:598-753 [31443]
        region d:598-753 [31444]
      6. 1qws
        complexed with hem; mutant
        
        region a:598-753 [96493]
        region b:598-753 [96495]
        region c:598-753 [96497]
        region d:598-753 [96499]
      7. 1ggj
        complexed with hdd; mutant
        
        region a:598-753 [31457]
        region b:598-753 [31458]
        region c:598-753 [31459]
        region d:598-753 [31460]
      8. 1qf7
        complexed with hem; mutant
        
        region a:598-753 [31461]
        region b:598-753 [31462]
        region c:598-753 [31463]
        region d:598-753 [31464]
      9. 1p7z
        complexed with hem; mutant
        
        region a:598-753 [94329]
        region b:598-753 [94331]
        region c:598-753 [94333]
        region d:598-753 [94335]
      10. 1ggh
        complexed with hem; mutant
        
        region a:598-753 [31465]
        region b:598-753 [31466]
        region c:598-753 [31467]
        region d:598-753 [31468]
      11. 1ggk
        complexed with hem; mutant
        
        region a:598-753 [31453]
        region b:598-753 [31454]
        region c:598-753 [31455]
        region d:598-753 [31456]
      12. 1p7y
        complexed with hem; mutant
        
        region a:598-753 [94321]
        region b:598-753 [94323]
        region c:598-753 [94325]
        region d:598-753 [94327]
      13. 1ggf
        complexed with hem, peo; mutant
        
        region a:598-753 [31469]
        region b:598-753 [31470]
        region c:598-753 [31471]
        region d:598-753 [31472]
      14. 1iph
        complexed with hem
        
        region a:598-753 [31473]
        region b:598-753 [31474]
        region c:598-753 [31475]
        region d:598-753 [31476]
    2. Neurospora crassa [TaxId: 5141] [117483] (1)
      SQ Q9C168 68-765
      1. 1sy7
        complexed with hdd, hem
        
        region a:553-736 [112161]
        region b:553-736 [112162]
5. Aspartyl dipeptidase PepE [52331] (1)
  probable circular permutation in the common core; contains a catalytic Ser-His-Glu triad
  1. Aspartyl dipeptidase PepE [52332]
    1. Salmonella typhimurium [TaxId: 90371] [52333] (2)
      1. 1fye
        complexed with cd
        
        chain a [31477]
      2. 1fy2
        complexed with cd
        
        chain a [31478]
6. ThuA-like [110486] (1)
  Pfam 06283; overall fold is very similar the class I GAT family but the putative active site has a different structure
  1. GK2113 homologue [110487]
    1. Bacillus stearothermophilus [TaxId: 1422] [110488] (1)
      SQ Q5KY38 # 99% sequence identity (Geobacillus kaustophilus TaxID:1462)
      1. 1t0b
        Structural genomics target
        complexed with zn
        
        chain a [106199]
        chain b [106200]
        chain c [106201]
        chain d [106202]
        chain e [106203]
        chain f [106204]
        chain g [106205]
        chain h [106206]
7. LD-carboxypeptidase A N-terminal domain-like [142074] (1)
  N-terminal half of Pfam 02016
  1. LD-carboxypeptidase A, N-terminal domain [142075]
    1. Pseudomonas aeruginosa [TaxId: 287] [142076] (8)
      SQ Q9HTZ1 3-169! SQ Q9HTZ1 5-142! SQ Q9HTZ1 5-169
      1. 1zl0
        complexed with edo, gol, k, na, peg, tla
        
        region a:3-169 [125232]
      2. 1zl0
        automatically matched to 1ZL0 A:3-169
        complexed with edo, gol, k, na, peg, tla
        
        region b:7-169 [125234]
      3. 1zrs
        
        region a:5-169 [125557]
      4. 1zrs
        automatically matched to 1ZRS A:5-169
        
        region b:7-169 [125559]
      5. 2aun
        mutant
        
        region a:5-142 [127335]
      6. 2aun
        automatically matched to 2AUN A:5-142
        mutant
        
        region b:7-142 [127337]
      7. 2aum
        mutant
        
        region a:5-142 [127331]
      8. 2aum
        automatically matched to 2AUM A:5-142
        mutant
        
        region b:7-142 [127333]
8. HTS-like [142077] (1)
  Pfam 04204
  1. Homoserine O-succinyltransferase HTS (MetA) [142078]
    1. Bacillus cereus [TaxId: 1396] [142079] (1)
      SQ Q72X44 17-297
      1. 2ghr
        complexed with so4
        
        region a:17-297 [135208]
9. STM3548-like [159492] (1)
  Pfam 07090; DUF1355
  1. Putative cytoplasmic protein STM3548 [159493]
    1. Salmonella typhimurium [TaxId: 90371] [159494] (6)
      SQ Q8ZLF9 8-253
      1. 2gk3
        complexed with gol
        
        region a:8-253 [147123]
      2. 2gk3
        automatically matched to 2GK3 A:8-253
        complexed with gol
        
        region b:8-253 [147124]
      3. 2gk3
        automatically matched to 2GK3 A:8-253
        complexed with gol
        
        region c:8-253 [147125]
      4. 2gk3
        automatically matched to 2GK3 A:8-253
        complexed with gol
        
        region d:8-253 [147126]
      5. 2gk3
        automatically matched to 2GK3 A:8-253
        complexed with gol
        
        region e:8-253 [147127]
      6. 2gk3
        automatically matched to 2GK3 A:8-253
        complexed with gol
        
        region f:8-253 [147128]