Structural Classification of Proteins
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Family: 5'(3')-deoxyribonucleotidase (dNT-2)

the insertion subdomain is a 4-helical bundle; dephosphorylates dUMP and dTMP

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: HAD-like [56783]
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
  4. Superfamily: HAD-like [56784]
    usually contains an insertion (sub)domain after strand 1
    link to SUPERFAMILY database - Superfamily
  5. Family: 5'(3')-deoxyribonucleotidase (dNT-2) [82382]
    the insertion subdomain is a 4-helical bundle; dephosphorylates dUMP and dTMP

Protein Domains:

  1. 5'(3')-deoxyribonucleotidase (dNT-2) [82383]
    1. Human (Homo sapiens) [TaxId: 9606] [82384] (12)
      1. 1q92 picpic
        complexed with drm, gol, mg
        1. chain a [96250] picpiclink
      2. 1q91 picpic
        complexed with dpb, mg, po4
        1. chain a [96249] picpiclink
      3. 1z4k picpic
        automatically matched to 1Z4I A:34-227
        complexed with mg, t3p; mutant
        1. region a:34-227 [124435] picpiclink
      4. 1mh9 picpic
        complexed with mg, po4
        1. chain a [79118] picpiclink
      5. 1z4j picpic
        automatically matched to 1Z4I A:34-227
        complexed with gol, mg, u2p; mutant
        1. region a:34-227 [124434] picpiclink
      6. 1z4m picpic
        automatically matched to 1Z4I A:34-227
        complexed with gol, mg, u5p; mutant
        1. region a:34-227 [124437] picpiclink
      7. 2jau picpic
        automatically matched to d1z4ia1
        complexed with atm, mg, po4; mutant
        1. region a:34-227 [147952] picpiclink
      8. 1z4l picpic
        automatically matched to 1Z4I A:34-227
        complexed with mg, tmp; mutant
        1. region a:34-227 [124436] picpiclink
      9. 1z4i picpic
        complexed with gol, mg, ump; mutant
        1. region a:34-227 [124433] picpiclink
      10. 2jaw picpic
        automatically matched to d1z4ia1
        complexed with bvp, mg; mutant
        1. region a:34-227 [147953] picpiclink
      11. 1z4p picpic
        automatically matched to 1Z4I A:34-227
        complexed with dgp, mg; mutant
        1. region x:34-227 [124442] picpiclink
      12. 1z4q picpic
        automatically matched to 1Z4I A:34-227
        complexed with d4m, mg; mutant
        1. region a:34-227 [124443] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk