Structural Classification of Proteins
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Protein: D-ribose-5-phosphate isomerase (RpiA), catalytic domain from Archaeon Pyrococcus horikoshii [TaxId: 53953]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: NagB/RpiA/CoA transferase-like [100949]
    core: 3 layers: a/b/a; parallel or mixed beta-sheet of 6 strands, order 321456
  4. Superfamily: NagB/RpiA/CoA transferase-like [100950]
    link to SUPERFAMILY database - Superfamily
  5. Family: D-ribose-5-phosphate isomerase (RpiA), catalytic domain [75176]
    share a common phosphate-binding site with the NagB-like family; part of sheet is folded upon itself and forms a barrel-like structure like the CoA transferase subunits
  6. Protein: D-ribose-5-phosphate isomerase (RpiA), catalytic domain [75177]
  7. Species: Archaeon Pyrococcus horikoshii [TaxId: 53953] [75179]

PDB Entry Domains:

  1. 1lk5 picpicxref
    complexed with cl, na
    1. region a:1-130,a:211-229 [73960] picpiclink
    2. region b:1-130,b:211-229 [73962] picpiclink
    3. region c:1-130,c:211-229 [73964] picpiclink
    4. region d:1-130,d:211-229 [73966] picpiclink
  2. 1lk7 picpicxref
    complexed with cl, der, na
    1. region a:1-130,a:211-229 [73968] picpiclink
    2. region b:1-130,b:211-229 [73970] picpiclink
    3. region c:1-130,c:211-229 [73972] picpiclink
    4. region d:1-130,d:211-229 [73974] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk