Structural Classification of Proteins
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Protein: Oxalyl-CoA decarboxylase from Oxalobacter formigenes [TaxId: 847]

SQ P40149 370-552

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Thiamin diphosphate-binding fold (THDP-binding) [52517]
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. Superfamily: Thiamin diphosphate-binding fold (THDP-binding) [52518]
    there are two different functional modules of this fold: pyridine-binding (Pyr) and pyrophosphate-binding (PP) modules
    two Pyr and two PP modules assemble together in a conserved heterotetrameric core that binds two THDP coenzyme molecules
    link to SUPERFAMILY database - Superfamily
  5. Family: Pyruvate oxidase and decarboxylase PP module [88749]
    the N-terminal, Pyr module is separated from the C-terminal, PP module by an alpa/beta domain of Rossmann-like topology
  6. Protein: Oxalyl-CoA decarboxylase [142209]
  7. Species: Oxalobacter formigenes [TaxId: 847] [142210]
    SQ P40149 370-552

PDB Entry Domains:

  1. 2ji7 picpicxrefxrefxrefxref
    automatically matched to d2c31a3
    complexed with adp, b3p, mg, oxt, pge
    1. region a:370-552 [148064] picpiclink
  2. 2ji7 picpicxrefxrefxrefxref
    automatically matched to d2c31a3
    complexed with adp, b3p, mg, oxt, pge
    1. region b:370-552 [148067] picpiclink
  3. 2c31 picpicxrefxrefxrefxref
    complexed with adp, mg, tzd
    1. region a:370-552 [129706] picpiclink
  4. 2c31 picpicxrefxrefxrefxref
    automatically matched to 2C31 A:370-552
    complexed with adp, mg, tzd
    1. region b:370-552 [129709] picpiclink
  5. 2ji6 picpicxrefxrefxrefxref
    automatically matched to d2c31a3
    complexed with adp, b3p, mg, oxk, pge, tpw
    1. region a:370-552 [148058] picpiclink
  6. 2ji6 picpicxrefxrefxrefxref
    automatically matched to d2c31a3
    complexed with adp, b3p, mg, oxk, pge, tpw
    1. region b:370-552 [148061] picpiclink
  7. 2ji9 picpicxrefxrefxrefxref
    automatically matched to d2c31a3
    complexed with adp, b3p, mg, tpw
    1. region a:370-552 [148076] picpiclink
  8. 2ji9 picpicxrefxrefxrefxref
    automatically matched to d2c31a3
    complexed with adp, b3p, mg, tpw
    1. region b:370-552 [148079] picpiclink
  9. 2ji8 picpicxrefxrefxrefxref
    automatically matched to d2c31a3
    complexed with adp, fyn, mg, pge, tpp
    1. region a:370-552 [148070] picpiclink
  10. 2ji8 picpicxrefxrefxrefxref
    automatically matched to d2c31a3
    complexed with adp, fyn, mg, pge, tpp
    1. region b:370-552 [148073] picpiclink
  11. 2jib picpicxrefxrefxrefxref
    automatically matched to d2c31a3
    complexed with adp, coa, mg, pge, tpp
    1. region a:370-552 [148082] picpiclink
  12. 2jib picpicxrefxrefxrefxref
    automatically matched to d2c31a3
    complexed with adp, coa, mg, pge, tpp
    1. region b:370-552 [148085] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk