Structural Classification of Proteins
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Protein: Initiation factor eIF2 gamma subunit, N-terminal (G) domain from Archaeon Pyrococcus abyssi [TaxId: 29292]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: P-loop containing nucleoside triphosphate hydrolases [52539]
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. Superfamily: P-loop containing nucleoside triphosphate hydrolases [52540]
    division into families based on beta-sheet topologies
    link to SUPERFAMILY database - Superfamily
  5. Family: G proteins [52592]
    core: mixed beta-sheet of 6 strands, order 231456; strand 2 is antiparallel to the rest
  6. Protein: Initiation factor eIF2 gamma subunit, N-terminal (G) domain [75204]
    includes rubredoxin-like zinc finger insert domain, res. 56-83, similar that of the Nop10-like family (scop_fa 144211)
  7. Species: Archaeon Pyrococcus abyssi [TaxId: 29292] [75205]

PDB Entry Domains:

  1. 1kk1 picpicxrefxref
    complexed with gnp, mg, zn; mutant
    1. region a:6-200 [72636] picpiclink
  2. 1kk3 picpicxrefxref
    complexed with gdp, mg, zn
    1. region a:6-200 [72642] picpiclink
  3. 1kjz picpicxrefxref
    complexed with zn; mutant
    1. region a:6-200 [72630] picpiclink
  4. 1kk0 picpicxrefxref
    complexed with mse, zn
    1. region a:6-200 [72633] picpiclink
  5. 1kk2 picpicxrefxref
    complexed with gdp, mg, zn; mutant
    1. region a:6-200 [72639] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk