Structural Classification of Proteins
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Protein: Dimeric tRNA splicing endonuclease, domains 2 and 4 from Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Restriction endonuclease-like [52979]
    core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest
  4. Superfamily: tRNA-intron endonuclease catalytic domain-like [53032]
    link to SUPERFAMILY database - Superfamily
  5. Family: tRNA-intron endonuclease catalytic domain-like [53033]
  6. Protein: Dimeric tRNA splicing endonuclease, domains 2 and 4 [102477]
    duplication: one subunit consists of two tetrameric tRNA splicing endonuclease subunit-like repeats
  7. Species: Archaeon Archaeoglobus fulgidus [TaxId: 2234] [102478]

PDB Entry Domains:

  1. 1r0v picpicxref
    1. region a:62-139 [96742] picpiclink
    2. region a:215-305 [96743] picpiclink
    3. region b:62-139 [96745] picpiclink
    4. region b:215-305 [96746] picpiclink
    5. region c:62-139 [96748] picpiclink
    6. region c:215-305 [96749] picpiclink
    7. region d:63-139 [96751] picpiclink
    8. region d:215-305 [96752] picpiclink
  2. 1r11 picpicxref
    1. region a:61-139 [96772] picpiclink
    2. region a:215-305 [96773] picpiclink
    3. region b:61-139 [96776] picpiclink
    4. region b:215-305 [96777] picpiclink
  3. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1r11a1
    complexed with a23, du
    1. region a:64-142 [135295] picpiclink
  4. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1r0va2
    complexed with a23, du
    1. region a:218-308 [135296] picpiclink
  5. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1r11a1
    complexed with a23, du
    1. region b:63-141 [135299] picpiclink
  6. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1r0va2
    complexed with a23, du
    1. region b:217-307 [135300] picpiclink
  7. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1r11a1
    complexed with a23, du
    1. region c:63-141 [135303] picpiclink
  8. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1r0va2
    complexed with a23, du
    1. region c:217-307 [135304] picpiclink
  9. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1r11a1
    complexed with a23, du
    1. region d:64-142 [135307] picpiclink
  10. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
    automatically matched to d1r0va2
    complexed with a23, du
    1. region d:218-308 [135308] picpiclink
  11. 1rlv picpicxref
    1. region a:61-139 [97652] picpiclink
    2. region a:215-305 [97653] picpiclink
    3. region b:61-139 [97656] picpiclink
    4. region b:215-305 [97657] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk