Structural Classification of Proteins
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Fold: Caspase-like

3 layers, a/b/a; core: mixed beta-sheet of 6 strands, order 213456, strand 6 is antiparallel to the rest

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Caspase-like [52128]
    3 layers, a/b/a; core: mixed beta-sheet of 6 strands, order 213456, strand 6 is antiparallel to the rest

Superfamilies:

  1. Caspase-like [52129] (2)
    mature protein may be composed of two chains folded in a single domain
    link to SUPERFAMILY database - Superfamily
    1. Caspase catalytic domain [52130] (7)
      1. Apopain (caspase-3, cpp32) [52131]
        1. Human (Homo sapiens) [TaxId: 9606] [52132] (31) picpic
      2. Interleukin-1beta converting enzyme (a cysteine protease) [52133]
        1. Human (Homo sapiens) [TaxId: 9606] [52134] (14) picpic
          SQ P29466 125-297,317-404
      3. Caspase-1 [102526]
        1. Fall armyworm (Spodoptera frugiperda) [TaxId: 7108] [102527] (1) picpic
      4. Caspase-2 [102528]
        1. Human (Homo sapiens) [TaxId: 9606] [102529] (1) picpic
      5. Caspase-7 [63961]
        1. Human (Homo sapiens) [TaxId: 9606] [63962] (9) picpic
          SQ P55210 57-303
      6. Caspase-8 [52135]
        1. Human (Homo sapiens) [TaxId: 9606] [52136] (6) picpic
      7. Caspase-9 [69443]
        1. Human (Homo sapiens) [TaxId: 9606] [69444] (2) picpic
    2. Gingipain R (RgpB), N-terminal domain [52137] (1)
      contains extra N-terminal alpha/beta subdomain
      1. Gingipain R (RgpB), N-terminal domain [52138]
        Arginine-specific cysteine proteinase
        1. Porphyromonas gingivalis [TaxId: 837] [52139] (1) picpic
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk