Structural Classification of Proteins
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Fold: vWA-like

core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 321456; strand 3 is antiparallel to the rest

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: vWA-like [53299]
    core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 321456; strand 3 is antiparallel to the rest

Superfamilies:

  1. vWA-like [53300] (5)
    link to SUPERFAMILY database - Superfamily
    1. Integrin A (or I) domain [53301] (12)
      1. Integrin CD11a/CD18 (Leukocyte function associated antigen-1, LFA-1) [53302]
        1. Human (Homo sapiens) [TaxId: 9606] [53303] (23)
          SQ P20701 153-334
          1. 1mjn picpic
            complexed with mg; mutant
            1. chain a [79210] picpiclink
          2. 2ica picpic
            automatically matched to d1rd4a_
            complexed with 2ic
            1. region a:129-306 [137236] picpiclink
          3. 1xuo picpic
            automatically matched to d1dgqa_
            complexed with la1, mg
            1. region a:128-308 [122336] picpiclink
          4. 1xuo picpic
            automatically matched to d1dgqa_
            complexed with la1, mg
            1. region b:128-302 [122337] picpiclink
          5. 2o7n picpic
            automatically matched to d1rd4a_
            complexed with 2o7
            1. region a:129-306 [138929] picpiclink
          6. 3bqn picpic
            automatically matched to d1dgqa_
            complexed with bqn
            1. region b:128-309 [155501] picpiclink
          7. 3bqn picpic
            automatically matched to d1dgqa_
            complexed with bqn
            1. region c:128-309 [155502] picpiclink
          8. 1lfa picpic
            complexed with cl, mn
            1. chain a [34122] picpiclink
            2. chain b [34123] picpiclink
          9. 1zop picpic
            complexed with cl, mn; mutant
            1. chain a [34124] picpiclink
            2. chain b [34125] picpiclink
          10. 1xdg picpic
            complexed with ab8, mg
            1. chain a [109569] picpiclink
            2. chain b [109570] picpiclink
          11. 3bqm picpic
            automatically matched to d1dgqa_
            complexed with bqm
            1. region b:128-309 [155499] picpiclink
          12. 3bqm picpic
            automatically matched to d1dgqa_
            complexed with bqm
            1. region c:128-309 [155500] picpiclink
          13. 1xdd picpic
            complexed with aay, mg
            1. chain a [109567] picpiclink
            2. chain b [109568] picpiclink
          14. 1mq9 picpic
            complexed with mn; mutant
            1. chain a [79411] picpiclink
          15. 1zon picpic
            mutant
            1. chain a [34126] picpiclink
          16. 3e2m picpic
            automatically matched to d1dgqa_
            complexed with e2m
            1. region a:128-309 [157989] picpiclink
          17. 3e2m picpic
            automatically matched to d1dgqa_
            complexed with e2m
            1. region b:128-309 [157990] picpiclink
          18. 1rd4 picpic
            complexed with l08
            1. chain a [97304] picpiclink
            2. chain b [97305] picpiclink
            3. chain c [97306] picpiclink
            4. chain d [97307] picpiclink
          19. 1cqp picpic
            complexed with lovastatin
            complexed with 803, mg
            1. chain a [34127] picpiclink
            2. chain b [34128] picpiclink
          20. 1mqa picpic
            mutant
            1. chain a [79412] picpiclink
          21. 1zoo picpic
            complexed with cl, mg; mutant
            1. chain a [34129] picpiclink
            2. chain b [34130] picpiclink
          22. 1mq8 picpicxrefxref
            complex with ICAM-1
            complexed with mg, nag; mutant
            1. chain b [79407] picpiclink
            2. chain d [79410] picpiclink
          23. 1dgq picpic
            1. chain a [34131] picpiclink
      2. von Willebrand factor A3 domain, vWA3 [53304]
        1. Human (Homo sapiens) [TaxId: 9606] [53305] (4)
          1. 1atz picpic
            1. chain a [34132] picpiclink
            2. chain b [34133] picpiclink
          2. 2adf picpicxrefxrefxref
            automatically matched to d1fe8c_
            complexed with acy, gol, so4
            1. region a:922-1110 [126584] picpiclink
          3. 1fe8 picpicxrefxrefxrefxref
            complexed with cac, fuc, nag
            1. chain a [59783] picpiclink
            2. chain b [59784] picpiclink
            3. chain c [59785] picpiclink
          4. 1ao3 picpic
            1. chain a [34134] picpiclink
            2. chain b [34135] picpiclink
      3. von Willebrand factor A1 domain, vWA1 [53306]
        1. Human (Homo sapiens) [TaxId: 9606] [53307] (9)
          1. 1ijb picpic
            mutant
            1. chain a [71229] picpiclink
          2. 1fns picpicxrefxrefxrefxref
            mutant
            1. chain a [34136] picpiclink
          3. 1auq picpic
            complexed with ium
            1. chain a [34137] picpiclink
          4. 1oak picpicxrefxrefxrefxref
            1. chain a [34138] picpiclink
          5. 1sq0 picpicxref
            complexed with platelet glycoprotein Ib alpha chain
            mutant
            1. chain a [98959] picpiclink
          6. 1uex picpicxrefxref
            complexed with bitiscetin
            1. chain c [99284] picpiclink
          7. 1ijk picpicxrefxref
            complexed with botrocetin
            mutant
            1. chain a [71234] picpiclink
          8. 1u0n picpicxrefxrefxref
            automatically matched to d1auq__
            mutant
            1. region a:498-705 [119405] picpiclink
          9. 1m10 picpicxref
            complexed with glycoprotein Ib alpha domain
            mutant
            1. chain a [74361] picpiclink
        2. Mouse (Mus musculus) [TaxId: 10090] [159676] (1)
          SQ Q8CIZ8 1270-1465
          1. 1u0o picpicxrefxref
            1. region c:507-702 [144382] picpiclink
      4. Integrin alpha M (CR3, CD11b/CD18, Mac-1 alpha subunit) [53308]
        1. Human (Homo sapiens) [TaxId: 9606] [53309] (9)
          1. 1mf7 picpic
            mutant
            1. chain a [84937] picpiclink
          2. 1na5 picpic
            1. chain a [85483] picpiclink
          3. 1ido picpic
            complexed with mg
            1. chain a [34139] picpiclink
          4. 1jlm picpic
            complexed with mn
            1. chain a [34140] picpiclink
          5. 1m1u picpic
            complexed with ca; mutant
            1. chain a [74421] picpiclink
          6. 1idn picpic
            complexed with ace
            1. chain 1 [34141] picpiclink
            2. chain 2 [34142] picpiclink
          7. 1bhq picpic
            complexed with ace, cd
            1. chain 1 [34145] picpiclink
            2. chain 2 [34146] picpiclink
          8. 1bho picpic
            complexed with ace, mg
            1. chain 1 [34143] picpiclink
            2. chain 2 [34144] picpiclink
          9. 1n9z picpic
            complexed with mg; mutant
            1. chain a [85478] picpiclink
      5. Integrin alpha1-beta1 [53310]
        1. Human (Homo sapiens) [TaxId: 9606] [53311] (3)
          1. 1pt6 picpic
            complexed with gol, mg
            1. chain a [95091] picpiclink
            2. chain b [95092] picpiclink
          2. 1qc5 picpic
            complexed with mg; mutant
            1. chain a [34147] picpiclink
            2. chain b [34148] picpiclink
          3. 1qcy picpic
            complexed with mg; mutant
            1. chain a [96340] picpiclink
        2. Rat (Rattus norvegicus) [TaxId: 10116] [53312] (4)
          1. 2b2x picpicxrefxrefxrefxref
            automatically matched to d1mhpa_
            complexed with mg; mutant
            1. region a:146-336 [127748] picpiclink
          2. 2b2x picpicxrefxrefxrefxref
            automatically matched to d1mhpa_
            complexed with mg; mutant
            1. region b:147-336 [127749] picpiclink
          3. 1ck4 picpic
            1. chain a [34149] picpiclink
            2. chain b [34150] picpiclink
          4. 1mhp picpicxrefxrefxrefxrefxrefxref
            complexed with humanized neutralizing Fab
            complexed with mn; mutant
            1. chain a [84965] picpiclink
            2. chain b [84966] picpiclink
      6. Integrin alpha2-beta1 [53313]
        1. Human (Homo sapiens) [TaxId: 9606] [53314] (3)
          SQ P17301 172-364
          1. 1v7p picpicxrefxref
            complexed with cl, mn, nag, po4; mutant
            1. chain c [108408] picpiclink
          2. 1aox picpic
            complexed with mg; mutant
            1. chain a [34151] picpiclink
            2. chain b [34152] picpiclink
          3. 1dzi picpicxref
            complexed with co, nh2
            1. chain a [59142] picpiclink
      7. Integrin alpha-x beta2 [82456]
        Leukocyte adhesion glycoprotein P150,95 alpha chain
        1. Human (Homo sapiens) [TaxId: 9606] [82457] (1)
          1. 1n3y picpic
            mutant
            1. chain a [79976] picpiclink
      8. Integrin beta A domain [69542]
        1. Human (Homo sapiens) [TaxId: 9606] [69543] (5)
          SQ P05106 27-716 ! SQ P05106 27-466
          1. 1tye picpicxrefxrefxref
            complexed with ca, cac, man, mg, nag
            1. region b:107-354 [112831] picpiclink
            2. region d:107-354 [112835] picpiclink
            3. region f:107-354 [112839] picpiclink
          2. 1m1x picpicxrefxrefxrefxrefxref
            complexed with mn, nag
            1. region b:107-354 [74427] picpiclink
          3. 1l5g picpicxrefxrefxrefxrefxref
            complexed with mn, mva, nag
            1. region b:107-354 [73586] picpiclink
          4. 1jv2 picpicxrefxrefxrefxrefxref
            complexed with ca, nag
            1. region b:107-354 [67339] picpiclink
          5. 1u8c picpicxrefxrefxrefxrefxrefxref
            complexed with ca, nag
            1. region b:1107-1354 [113121] picpiclink
      9. Complement factor B domain [102541]
        1. Human (Homo sapiens) [TaxId: 9606] [102542] (5)
          SQ P00751 268-764
          1. 1q0p picpic
            complexed with mn; mutant
            1. chain a [95507] picpiclink
          2. 1rrk picpicxref
            complexed with co, iod, na; mutant
            1. region a:243-452 [111925] picpiclink
          3. 1rtk picpicxref
            complexed with gbs, iod, mg, na; mutant
            1. region a:243-452 [111933] picpiclink
          4. 2ok5 picpicxrefxrefxref
            complexed with bma, gol, man, nag
            1. region a:200-452 [139124] picpiclink
          5. 1rs0 picpicxref
            complexed with dfp, iod, mg, na; mutant
            1. region a:243-452 [111931] picpiclink
      10. Capillary morphogenesis protein 2 domain [102543]
        Anthrax toxin receptor 2
        1. Human (Homo sapiens) [TaxId: 9606] [102544] (3)
          SQ P58335 41-210
          1. 1shu picpic
            complexed with mg
            1. chain x [98882] picpiclink
          2. 1sht picpic
            complexed with act, mg
            1. chain x [98881] picpiclink
          3. 1t6b picpicxref
            complexed with ca, mn, na, pg4
            1. chain y [106557] picpiclink
    2. Trunk domain of Sec23/24 [82458] (2)
      1. Sec23 [82459]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [82460] (3)
          1. 2qtv picpicxrefxrefxrefxrefxref
            automatically matched to d1m2oa3
            complexed with gnp, mg, zn
            1. region a:120-390 [151359] picpiclink
          2. 1m2o picpicxrefxrefxrefxrefxref
            complexed with gnp, mg, zn
            1. region a:120-390 [78482] picpiclink
            2. region c:120-390 [78488] picpiclink
          3. 1m2v picpicxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with zn
            1. region a:120-390 [78494] picpiclink
      2. Sec24 [82461]
        1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [82462] (4)
          1. 1pd0 picpicxrefxrefxrefxref
            complexed with a snare peptide
            complexed with zn
            1. region a:301-552 [94504] picpiclink
          2. 1pd1 picpicxrefxrefxrefxref
            complexed with a snare peptide
            complexed with zn
            1. region a:301-552 [94509] picpiclink
          3. 1pcx picpicxrefxrefxrefxref
            complexed with a snare peptide
            complexed with zn
            1. region a:301-552 [94499] picpiclink
          4. 1m2v picpicxrefxrefxrefxrefxrefxrefxrefxrefxref
            complexed with zn
            1. region b:301-552 [78499] picpiclink
    3. Ku70 subunit N-terminal domain [100959] (1)
      1. Ku70 subunit N-terminal domain [100960]
        1. Human (Homo sapiens) [TaxId: 9606] [100961] (2)
          1. 1jey picpicxrefxrefxref
            1. region a:34-253 [90371] picpiclink
          2. 1jeq picpicxrefxrefxrefxref
            1. region a:35-253 [90367] picpiclink
    4. Ku80 subunit N-terminal domain [100962] (1)
      1. Ku80 subunit N-terminal domain [100963]
        1. Human (Homo sapiens) [TaxId: 9606] [100964] (2)
          1. 1jey picpicxrefxrefxref
            1. region b:6-241 [90373] picpiclink
          2. 1jeq picpicxrefxrefxrefxref
            1. region b:6-241 [90369] picpiclink
    5. RoRNP C-terminal domain-like [142565] (1)
      1. 60-kda SS-A/Ro ribonucleoprotein, RoRNP [142566]
        1. African clawed frog (Xenopus laevis) [TaxId: 8355] [142567] (5)
          SQ P42700 364-537
          1. 1yvr picpicxref
            automatically matched to 1YVP A:364-537
            1. region a:364-537 [124117] picpiclink
          2. 1yvp picpicxrefxref
            complexed with act, iu, mg
            1. region a:364-537 [124109] picpiclink
          3. 1yvp picpicxrefxref
            automatically matched to 1YVP A:364-537
            complexed with act, iu, mg
            1. region b:364-537 [124111] picpiclink
          4. 2i91 picpicxrefxref
            automatically matched to 1YVP A:364-537
            complexed with act, mg
            1. region a:364-537 [137106] picpiclink
          5. 2i91 picpicxrefxref
            automatically matched to 1YVP A:364-537
            complexed with act, mg
            1. region b:364-537 [137108] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
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