Structural Classification of Proteins
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Family: GABA-aminotransferase-like

formerly omega-Aminoacid:pyruvate aminotransferase-like

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: PLP-dependent transferase-like [53382]
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. Superfamily: PLP-dependent transferases [53383]
    link to SUPERFAMILY database - Superfamily
  5. Family: GABA-aminotransferase-like [53417]
    formerly omega-Aminoacid:pyruvate aminotransferase-like

Protein Domains:

  1. Dialkylglycine decarboxylase [53418]
    1. Pseudomonas cepacia [TaxId: 292] [53419] (16) picpic
  2. Glutamate-1-semialdehyde aminomutase (aminotransferase) [53420]
    1. Synechococcus sp., strain GR6 [TaxId: 1131] [53421] (3) picpic
    2. Synechococcus elongatus [TaxId: 32046] [142669] (1) picpic
      SQ Q8DLK8 45-437
  3. Ornithine aminotransferase [53422]
    1. Human (Homo sapiens) [TaxId: 9606] [53423] (10) picpic
    2. Plasmodium yoelii yoelii [TaxId: 73239] [142670] (6) picpic
      SQ Q7RT90 7-410
  4. 4-aminobutyrate aminotransferase, GABA-aminotransferase [53424]
    1. Pig (Sus scrofa) [TaxId: 9823] [53425] (3) picpic
    2. Escherichia coli [TaxId: 562] [110686] (14) picpic
      SQ P22256
  5. Phosphoserine aminotransferase, PSAT [53426]
    1. Bacillus circulans, subsp. alkalophilus [TaxId: 1397] [53427] (4) picpic
      SQ Q59196
    2. Escherichia coli [TaxId: 562] [53428] (2) picpic
    3. Bacillus alcalophilus [TaxId: 1445] [117697] (19) picpic
      SQ Q9RME2
  6. Serine hydroxymethyltransferase [53429]
    1. Rabbit (Oryctolagus cuniculus) [TaxId: 9986] [53430] (6) picpic
      SQ P07511
    2. Mouse (Mus musculus) [TaxId: 10090] [53431] (1) picpic
    3. Human (Homo sapiens) [TaxId: 9606] [53432] (1) picpic
    4. Escherichia coli [TaxId: 562] [53433] (2) picpic
    5. Bacillus stearothermophilus [TaxId: 1422] [75272] (7) picpic
    6. Human (Homo sapiens), mitochondrial [TaxId: 9606] [142671] (1) picpic
      SQ P34897 42-504
  7. 3-amino-5-hydroxybenzoic acid synthase (AHBA synthase) [53434]
    1. Amycolatopsis mediterranei [TaxId: 33910] [53435] (2) picpic
  8. Aminotransferase ArnB [82488]
    4-amino-4-deoxy-L-arabinose liposaccharide modifying enzyme
    1. Salmonella typhimurium [TaxId: 90371] [82489] (3) picpic
  9. 2-amino-3-ketobutyrate CoA ligase [64128]
    1. Escherichia coli [TaxId: 562] [64129] (1) picpic
  10. PLP-dependent acyl-CoA synthase (8-amino-7-oxonanoate synthase, AONS) [53436]
    1. Escherichia coli [TaxId: 562] [53437] (4) picpic
  11. Adenosylmethionine-8-amino-7-oxononanoate aminotransferase, BioA [53438]
    synonym: 7,8-diaminopelargonic acid synthase
    1. Escherichia coli [TaxId: 562] [53439] (11) picpic
  12. 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) [53440]
    1. Apple (Malus domestica) [TaxId: 3750] [53441] (4) picpic
    2. Tomato (Lycopersicon esculentum) [TaxId: 4081] [64130] (2) picpic
  13. Aminotransferase homolog WlaK (PglE, Cj1121c) [102603]
    1. Campylobacter jejuni [TaxId: 197] [102604] (3) picpic
  14. Spore coat polysaccharide biosynthesis protein C [142672]
    1. Helicobacter pylori [TaxId: 210] [142673] (6) picpic
      SQ O25130 2-372
  15. Acetylornithine/acetyl-lysine aminotransferase ArgD [142674]
    1. Thermus thermophilus [TaxId: 274] [142675] (6) picpic
      SQ Q93R93 9-395
  16. 5-aminolevulinate synthase [142676]
    1. Rhodobacter capsulatus [TaxId: 1061] [142677] (12) picpic
      SQ P18079 2-397
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk