Structural Classification of Proteins
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Protein: Toxin B from Clostridium difficile [TaxId: 1496]

SQ P18177 1-542

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Nucleotide-diphospho-sugar transferases [53447]
    3 layers: a/b/a; mixed beta-sheet of 7 strands, order 3214657; strand 6 is antiparallel to the rest
  4. Superfamily: Nucleotide-diphospho-sugar transferases [53448]
    link to SUPERFAMILY database - Superfamily
  5. Family: Glycosylating toxin catalytic domain-like [159726]
    contains Glycosyltransferase sugar-binding region containing DXD motif, Pfam 04488
  6. Protein: Toxin B [159731]
  7. Species: Clostridium difficile [TaxId: 1496] [159732]
    SQ P18177 1-542

PDB Entry Domains:

  1. 2bvl picpic
    complexed with glc, mn, so4, tbr, udp; mutant
    1. region a:1-542 [146219] picpiclink
  2. 2bvm picpic
    automatically matched to 2BVL A:1-542
    complexed with glc, mn, so4, udp; mutant
    1. region a:1-542 [146220] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk