Structural Classification of Proteins
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Protein: UBA3 from Human (Homo sapiens) [TaxId: 9606]

SQ Q8TBC4 33-458

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a/b) [51349]
    Mainly parallel beta sheets (beta-alpha-beta units)
  3. Fold: Activating enzymes of the ubiquitin-like proteins [69571]
    3 layers: a/b/a; mixed beta-sheet of 8 strands, order 32145678; strands 6 and 8 are antiparallel to the rest
  4. Superfamily: Activating enzymes of the ubiquitin-like proteins [69572]
    transfer adenylyl group to the C-terminal carboxyl group of the ubiquitin and MoaD/ThiS-related proteins
    the ATP nucleotide-binding site is similar to that of the NAD-binding Rossmann-folds
    link to SUPERFAMILY database - Superfamily
  5. Family: Ubiquitin activating enzymes (UBA) [89763]
    the common fold is elaborated with additional (sub)domains
  6. Protein: UBA3 [89764]
    a subunit of the heterodimeric E1 enzyme for NEDD8; contains an all-alpha insert subdomain of the FF-like fold (residues 210-288) and an extra C-terminal alpha+beta subdomain (partly disordered)
  7. Species: Human (Homo sapiens) [TaxId: 9606] [89765]
    SQ Q8TBC4 33-458

PDB Entry Domains:

  1. 1yov picpicxrefxref
    automatically matched to d1ngvb_
    complexed with zn
    1. region b:12-437 [123786] picpiclink
  2. 1yov picpicxrefxref
    automatically matched to d1ngvb_
    complexed with zn
    1. region d:19-436 [123788] picpiclink
  3. 1y8x picpicxref
    C-terminal, E2 binding domain only; (this domain belongs to Pfam 08825)
    1. region b:349-440 [144607] picpiclink
  4. 1tt5 picpicxref
    complexed with zn
    1. chain b [107292] picpiclink
    2. chain d [107294] picpiclink
  5. 2nvu picpicxrefxrefxrefxrefxref
    automatically matched to d1ngvb_
    complexed with atp, mg, zn; mutant
    1. region b:2012-2441 [138661] picpiclink
  6. 1r4m picpicxrefxref
    complexed with zn; mutant
    1. chain b [97000] picpiclink
    2. chain d [97002] picpiclink
    3. chain f [97004] picpiclink
    4. chain h [97006] picpiclink
  7. 3dbl picpicxrefxrefxrefxrefxref
    automatically matched to d1r4mb_
    complexed with zn; mutant
    1. region b:12-441 [157474] picpiclink
  8. 3dbl picpicxrefxrefxrefxrefxref
    automatically matched to d1r4mb_
    complexed with zn; mutant
    1. region d:12-441 [157476] picpiclink
  9. 3dbl picpicxrefxrefxrefxrefxref
    automatically matched to d1r4mb_
    complexed with zn; mutant
    1. region f:12-441 [157478] picpiclink
  10. 3dbl picpicxrefxrefxrefxrefxref
    automatically matched to d1r4mb_
    complexed with zn; mutant
    1. region h:12-441 [157480] picpiclink
  11. 1r4n picpicxrefxref
    complexed with atp, zn; mutant
    1. chain b [97012] picpiclink
    2. chain d [97014] picpiclink
    3. chain f [97016] picpiclink
    4. chain h [97018] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk