Structural Classification of Proteins
Family: Ribulose 1,5-bisphosphate carboxylase-oxygenase
Lineage:
Root:
scop
Class:
Alpha and beta proteins (a+b)
[53931]
Mainly antiparallel beta sheets (segregated alpha and beta regions)
Fold:
Ferredoxin-like
[54861]
alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
Superfamily:
RuBisCO, large subunit, small (N-terminal) domain
[54966]
C-terminal domain is beta/alpha barrel
uperfamily
Family:
Ribulose 1,5-bisphosphate carboxylase-oxygenase
[54967]
Protein Domains:
Ribulose 1,5-bisphosphate carboxylase-oxygenase [54968]
Tobacco (Nicotiana tabacum), variant turkish samsun
[TaxId: 4097]
[54969] (5)
3rub
complexed with so4
region l:22-147
[39232]
1ej7
complexed with po4
region l:18-147
[39233]
1rlc
complexed with cap
region l:22-147
[39236]
1rld
region a:22-147
[39234]
region b:22-147
[39235]
4rub
complexed with cap, cbx, mg
region a:9-147
[39237]
region b:9-147
[39238]
region c:9-147
[39239]
region d:9-147
[39240]
Spinach (Spinacia oleracea)
[TaxId: 3562]
[54970] (11)
8ruc
complexed with cap, mg
region a:9-147
[39245]
region c:9-147
[39246]
region e:9-147
[39247]
region g:9-147
[39248]
1ir1
complexed with cap, kcx, mg, mme
region a:12-147
[71283]
region b:12-147
[71285]
region c:12-147
[71287]
region d:12-147
[71289]
1rbo
complexed with cap
region l:9-147
[39249]
region b:9-147
[39250]
region e:9-147
[39251]
region h:9-147
[39252]
1aa1
complexed with 3pg, mg
region l:21-147
[39253]
region b:21-147
[39254]
region e:21-147
[39255]
region h:21-147
[39256]
1rxo
complexed with ca, rub
region l:9-147
[39257]
region b:9-147
[39258]
region e:9-147
[39259]
region h:9-147
[39260]
1aus
complexed with cbx, mg
region l:20-147
[39261]
1aus
duplicate of 1AUS L:20-147
complexed with cbx, mg
region m:20-147
[118410]
1aus
duplicate of 1AUS L:20-147
complexed with cbx, mg
region n:20-147
[118412]
1aus
duplicate of 1AUS L:20-147
complexed with cbx, mg
region o:20-147
[118414]
1rco
complexed with xdp
region l:9-147
[39262]
region b:9-147
[39263]
region e:9-147
[39264]
region h:9-147
[39265]
region k:9-147
[39266]
region o:9-147
[39267]
region r:9-147
[39268]
region v:9-147
[39269]
1rcx
complexed with rub
region l:9-147
[39270]
region b:9-147
[39271]
region e:9-147
[39272]
region h:9-147
[39273]
region k:9-147
[39274]
region o:9-147
[39275]
region r:9-147
[39276]
region v:9-147
[39277]
Galdieria partita
[TaxId: 83374]
[54971] (2)
1bwv
complexed with cap, mg
region a:7-149
[39278]
region c:7-149
[39279]
region e:7-149
[39280]
region g:7-149
[39281]
1iwa
complexed with so4
region a:6-149
[83727]
region c:6-149
[83730]
region e:6-149
[83733]
region g:6-149
[83736]
region i:6-149
[83739]
region k:6-149
[83742]
region m:6-149
[83745]
region o:6-149
[83748]
Chlamydomonas reinhardtii
[TaxId: 3055]
[69730] (74)
1gk8
complexed with cap, egl, mg, mme
region a:7-149
[65235]
region c:7-149
[65237]
region e:11-149
[65239]
region g:9-149
[65241]
2v6a
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region a:9-149
[152693]
2v6a
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region b:9-149
[152695]
2v6a
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region c:9-149
[152697]
2v6a
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region d:10-149
[152699]
2v6a
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region e:11-149
[152701]
2v6a
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region f:11-149
[152703]
2v6a
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region g:11-149
[152705]
2v6a
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region h:9-149
[152707]
1ir2
complexed with cap, cry, hyp, kcx, mg, mme, smc
region a:8-149
[71303]
region b:9-149
[71305]
region c:10-149
[71307]
region d:9-149
[71309]
region e:11-149
[71311]
region f:11-149
[71313]
region g:10-149
[71315]
region h:8-149
[71317]
region s:11-149
[71327]
region t:10-149
[71329]
region u:7-149
[71331]
region v:7-149
[71333]
region w:10-149
[71335]
region x:10-149
[71337]
region y:11-149
[71339]
region z:10-149
[71341]
1uw9
automatically matched to d1gk8a2
complexed with cap, edo, mg; mutant
region a:11-149
[119711]
1uw9
automatically matched to d1gk8a2
complexed with cap, edo, mg; mutant
region b:11-149
[119713]
1uw9
automatically matched to d1gk8a2
complexed with cap, edo, mg; mutant
region e:11-149
[119716]
1uw9
automatically matched to d1gk8a2
complexed with cap, edo, mg; mutant
region h:11-149
[119719]
1uw9
automatically matched to d1gk8a2
complexed with cap, edo, mg; mutant
region k:11-149
[119723]
1uw9
automatically matched to d1gk8a2
complexed with cap, edo, mg; mutant
region o:11-149
[119726]
1uw9
automatically matched to d1gk8a2
complexed with cap, edo, mg; mutant
region r:11-149
[119729]
1uw9
automatically matched to d1gk8a2
complexed with cap, edo, mg; mutant
region v:11-149
[119732]
2v67
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region a:10-149
[152621]
2v67
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region b:10-149
[152623]
2v67
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region c:10-149
[152625]
2v67
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region d:11-149
[152627]
2v67
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region e:11-149
[152629]
2v67
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region f:10-149
[152631]
2v67
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region g:10-149
[152633]
2v67
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region h:10-149
[152635]
2v63
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region a:9-149
[152594]
2v63
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region b:9-149
[152596]
2v63
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region c:9-149
[152598]
2v63
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region d:11-149
[152600]
2v63
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region e:11-149
[152602]
2v63
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region f:9-149
[152604]
2v63
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region g:9-149
[152606]
2v63
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region h:9-149
[152608]
1uzh
automatically matched to d1gk8a2
complexed with cap, edo, mg
region a:11-149
[119791]
1uzh
automatically matched to d1gk8a2
complexed with cap, edo, mg
region b:11-149
[119793]
1uzh
automatically matched to d1gk8a2
complexed with cap, edo, mg
region e:11-149
[119795]
1uzh
automatically matched to d1gk8a2
complexed with cap, edo, mg
region h:11-149
[119797]
1uzh
automatically matched to d1gk8a2
complexed with cap, edo, mg
region k:11-149
[119799]
1uzh
automatically matched to d1gk8a2
complexed with cap, edo, mg
region o:11-149
[119801]
1uzh
automatically matched to d1gk8a2
complexed with cap, edo, mg
region r:11-149
[119803]
1uzh
automatically matched to d1gk8a2
complexed with cap, edo, mg
region v:11-149
[119805]
2v68
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region a:10-149
[152645]
2v68
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region b:10-149
[152647]
2v68
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region c:10-149
[152649]
2v68
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region d:11-149
[152651]
2v68
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region e:10-149
[152653]
2v68
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region f:10-149
[152655]
2v68
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region g:10-149
[152657]
2v68
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region h:10-149
[152659]
1uwa
automatically matched to d1gk8a2
complexed with cap, edo, mg, pyc; mutant
region a:11-149
[119735]
1uwa
automatically matched to d1gk8a2
complexed with cap, edo, mg, pyc; mutant
region b:11-149
[119737]
1uwa
automatically matched to d1gk8a2
complexed with cap, edo, mg, pyc; mutant
region e:11-149
[119740]
1uwa
automatically matched to d1gk8a2
complexed with cap, edo, mg, pyc; mutant
region h:11-149
[119743]
1uwa
automatically matched to d1gk8a2
complexed with cap, edo, mg, pyc; mutant
region k:11-149
[119747]
1uwa
automatically matched to d1gk8a2
complexed with cap, edo, mg, pyc; mutant
region o:11-149
[119750]
1uwa
automatically matched to d1gk8a2
complexed with cap, edo, mg, pyc; mutant
region r:11-149
[119753]
1uwa
automatically matched to d1gk8a2
complexed with cap, edo, mg, pyc; mutant
region v:11-149
[119756]
1uzd
automatically matched to d1gk8a2
complexed with cap, edo, mg
region a:11-149
[119775]
1uzd
automatically matched to d1gk8a2
complexed with cap, edo, mg
region b:11-149
[119777]
1uzd
automatically matched to d1gk8a2
complexed with cap, edo, mg
region e:11-149
[119779]
1uzd
automatically matched to d1gk8a2
complexed with cap, edo, mg
region h:11-149
[119781]
1uzd
automatically matched to d1gk8a2
complexed with cap, edo, mg
region k:11-149
[119783]
1uzd
automatically matched to d1gk8a2
complexed with cap, edo, mg
region o:11-149
[119785]
1uzd
automatically matched to d1gk8a2
complexed with cap, edo, mg
region r:11-149
[119787]
1uzd
automatically matched to d1gk8a2
complexed with cap, edo, mg
region v:11-149
[119789]
2v69
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region a:11-149
[152669]
2v69
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region b:11-149
[152671]
2v69
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region c:12-149
[152673]
2v69
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region d:11-149
[152675]
2v69
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region e:11-149
[152677]
2v69
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region f:11-149
[152679]
2v69
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region g:11-149
[152681]
2v69
automatically matched to d1gk8a2
complexed with cap, edo, mg, mme; mutant
region h:12-149
[152683]
Alcaligenes eutrophus
[TaxId: 106590]
[54972] (1)
1bxn
complexed with po4
region a:22-150
[39282]
region c:22-150
[39283]
region e:22-150
[39284]
region g:22-150
[39285]
Synechococcus sp., strain pcc 6301
[TaxId: 1131]
[54973] (16)
1rbl
complexed with cap, cbx, mg
region a:9-147
[39286]
1rbl
duplicate of 1RBL A:9-147
complexed with cap, cbx, mg
region b:9-147
[118586]
1rbl
duplicate of 1RBL A:9-147
complexed with cap, cbx, mg
region c:9-147
[118588]
1rbl
duplicate of 1RBL A:9-147
complexed with cap, cbx, mg
region d:9-147
[118590]
1rbl
duplicate of 1RBL A:9-147
complexed with cap, cbx, mg
region e:9-147
[118592]
1rbl
duplicate of 1RBL A:9-147
complexed with cap, cbx, mg
region f:9-147
[118594]
1rbl
duplicate of 1RBL A:9-147
complexed with cap, cbx, mg
region g:9-147
[118596]
1rbl
duplicate of 1RBL A:9-147
complexed with cap, cbx, mg
region h:9-147
[118598]
1rsc
complexed with xbp
region a:9-147
[39287]
1rsc
duplicate of 1RSC A:9-147
complexed with xbp
region b:9-147
[118607]
1rsc
duplicate of 1RSC A:9-147
complexed with xbp
region c:9-147
[118609]
1rsc
duplicate of 1RSC A:9-147
complexed with xbp
region d:9-147
[118611]
1rsc
duplicate of 1RSC A:9-147
complexed with xbp
region e:9-147
[118613]
1rsc
duplicate of 1RSC A:9-147
complexed with xbp
region f:9-147
[118615]
1rsc
duplicate of 1RSC A:9-147
complexed with xbp
region g:9-147
[118617]
1rsc
duplicate of 1RSC A:9-147
complexed with xbp
region h:9-147
[118619]
Rhodospirillum rubrum
[TaxId: 1085]
[54974] (5)
5rub
region a:2-137
[39288]
region b:2-137
[39289]
2rus
complexed with for, mg
region a:2-137
[39290]
region b:3-137
[39291]
1rus
complexed with mp3
region a:3-137
[39294]
region b:3-137
[39295]
9rub
complexed with cbx, mg, rub
region a:2-137
[39292]
region b:2-137
[39293]
1rba
mutant
region a:5-137
[39296]
region b:5-137
[39297]
Archaeon Thermococcus kodakaraensis
[TaxId: 311400]
[69731] (1)
1geh
complexed with so4
region a:12-136
[65182]
region b:12-136
[65184]
region c:12-136
[65186]
region d:12-136
[65188]
region e:12-136
[65190]
Chlorobium tepidum
[TaxId: 1097]
[117975] (3)
SQ
Q8KBL4
1-428
1ykw
mutant
region a:4-145
[123566]
1ykw
automatically matched to 1YKW A:4-145
mutant
region b:4-145
[123568]
1tel
region a:1001-1145
[112406]
region b:2001-2145
[112408]
Rice (Oryza sativa)
[TaxId: 4530]
[117976] (1)
SQ
P12089
1wdd
complexed with cap, gol, mg, mme
region a:11-150
[114529]
region e:12-150
[114531]
Archaeon Halothiobacillus neapolitanus
[TaxId: 927]
[143362] (1)
SQ
O85040
16-142
1svd
complexed with gol, so4
region a:16-142
[119058]
Archaeon Pyrococcus horikoshii
[TaxId: 53953]
[143363] (10)
SQ
O58677
8-133
2d69
automatically matched to 2CWX A:8-133
complexed with so4
region a:8-133
[131293]
2d69
automatically matched to 2CWX A:8-133
complexed with so4
region b:8-133
[131295]
2d69
automatically matched to 2CWX A:8-133
complexed with so4
region d:8-133
[131297]
2d69
automatically matched to 2CWX A:8-133
complexed with so4
region e:9-133
[131299]
2cwx
region a:8-133
[130957]
2cwx
automatically matched to 2CWX A:8-133
region e:10-133
[130959]
2cxe
automatically matched to 2CWX A:8-133
region a:9-133
[130997]
2cxe
automatically matched to 2CWX A:8-133
region b:9-133
[130999]
2cxe
automatically matched to 2CWX A:8-133
region c:9-133
[131001]
2cxe
automatically matched to 2CWX A:8-133
region d:9-133
[131003]
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Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright
© 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk