Structural Classification of Proteins
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Family: tRNA pseudouridine synthase TruD

natural circular permutation in the catalytic domain; insertion of the family-specific alpha+beta subdomain

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Pseudouridine synthase [100877]
    consists of two alpha+beta subdomains with some similarity to the ferredoxin-like fold
  4. Superfamily: Pseudouridine synthase [55120]
    the active site is the most conserved structural region of the superfamily and is located between the subdomains
    link to SUPERFAMILY database - Superfamily
  5. Family: tRNA pseudouridine synthase TruD [103021]
    natural circular permutation in the catalytic domain; insertion of the family-specific alpha+beta subdomain

Protein Domains:

  1. tRNA pseudouridine synthase TruD [103022]
    1. Escherichia coli [TaxId: 562] [103023] (3)
      SQ Q57261
      family-specific insert subdomain: res. 158-301
      1. 1szw picpic
        1. chain a [99047] picpiclink
        2. chain b [99048] picpiclink
      2. 1si7 picpic
        1. chain a [98883] picpiclink
      3. 1sb7 picpic
        complexed with gol, po4
        1. chain a [105408] picpiclink
        2. chain b [105409] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk