Structural Classification of Proteins
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Superfamily: Lesion bypass DNA polymerase (Y-family), little finger domain

link to SUPERFAMILY database - Superfamily

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Lesion bypass DNA polymerase (Y-family), little finger domain [100878]
    beta-alpha-beta(2)-alpha-beta; antiparallel beta-sheet: order 1423; "reversed" ferredoxin-like topology
  4. Superfamily: Lesion bypass DNA polymerase (Y-family), little finger domain [100879]
    link to SUPERFAMILY database - Superfamily

Families:

  1. Lesion bypass DNA polymerase (Y-family), little finger domain [100880] (7)
    1. DinB homolog (DBH) [100881]
      1. Archaeon Sulfolobus solfataricus, DNA polymerase IV [TaxId: 2287] [100882] (62) picpic
      2. Archaeon Sulfolobus solfataricus [TaxId: 2287] [100883] (2) picpic
      3. Sulfolobus acidocaldarius Brock et al. 1972 (Sulfolobus acidocaldarius) [TaxId: 2285] [160394] (3) picpic
    2. DNA polymerase eta [100884]
      1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [100885] (5) picpic
    3. DNA polymerase IV [103036]
      1. Escherichia coli [TaxId: 562] [103037] (1) picpic
    4. DNA polymerase iota [111015]
      1. Human (Homo sapiens) [TaxId: 9606] [111016] (8) picpic
        SQ Q9UNA4
    5. DNA polymerase kappa [111017]
      1. Human (Homo sapiens) [TaxId: 9606] [111018] (1) picpic
        SQ Q9UBT6 71-517
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk