Structural Classification of Proteins
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Family: MPP-like

Common fold elaborated with many additional structures; duplication: each family member consists of two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)-beta structure, but only the N-terminal domain of MPP beta chain binds the catalytic metal

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: LuxS/MPP-like metallohydrolase [63410]
    core: beta-alpha-beta(2)-alpha(2); 2 layers: alpha/beta
  4. Superfamily: LuxS/MPP-like metallohydrolase [63411]
    Share the same "active site motif" HxxEH located in the first core helix, but differ in one of the zinc-binding residues
    link to SUPERFAMILY database - Superfamily
  5. Family: MPP-like [63412]
    Common fold elaborated with many additional structures; duplication: each family member consists of two similar domains of beta(2)-alpha(2)-beta(2)-alpha(5)-beta structure, but only the N-terminal domain of MPP beta chain binds the catalytic metal

Protein Domains:

  1. Mitochondrial processing peptidase (MPP) beta chain [64300]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [64301] (4)
      1. 1hr6 picpicxref
        complexed with epe, zn
        1. region b:24-245 [61166] picpiclink
        2. region b:246-462 [61167] picpiclink
        3. region d:20-245 [61170] picpiclink
        4. region d:246-462 [61171] picpiclink
        5. region f:20-245 [61174] picpiclink
        6. region f:246-462 [61175] picpiclink
        7. region h:23-245 [61178] picpiclink
        8. region h:246-462 [61179] picpiclink
      2. 1hr7 picpicxref
        complexed with zn; mutant
        1. region b:24-245 [61182] picpiclink
        2. region b:246-462 [61183] picpiclink
        3. region d:22-245 [61186] picpiclink
        4. region d:246-462 [61187] picpiclink
        5. region f:23-245 [61190] picpiclink
        6. region f:246-462 [61191] picpiclink
        7. region h:23-245 [61194] picpiclink
        8. region h:246-462 [61195] picpiclink
      3. 1hr8 picpicxref
        complexed with epe, zn; mutant
        1. region b:24-245 [61198] picpiclink
        2. region b:246-462 [61199] picpiclink
        3. region d:20-245 [61202] picpiclink
        4. region d:246-462 [61203] picpiclink
        5. region f:20-245 [61206] picpiclink
        6. region f:246-462 [61207] picpiclink
        7. region h:22-245 [61210] picpiclink
        8. region h:246-462 [61211] picpiclink
      4. 1hr9 picpicxref
        complexed with epe, zn; mutant
        1. region b:24-245 [61214] picpiclink
        2. region b:246-462 [61215] picpiclink
        3. region d:22-245 [61218] picpiclink
        4. region d:246-462 [61219] picpiclink
        5. region f:20-245 [61222] picpiclink
        6. region f:246-462 [61223] picpiclink
        7. region h:23-245 [61226] picpiclink
        8. region h:246-462 [61227] picpiclink
  2. Mitochondrial processing peptidase (MPP) alpha chain [64302]
    1. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [64303] (4)
      1. 1hr6 picpicxref
        complexed with epe, zn
        1. region a:14-233 [61164] picpiclink
        2. region a:234-470 [61165] picpiclink
        3. region c:16-233 [61168] picpiclink
        4. region c:234-468 [61169] picpiclink
        5. region e:14-233 [61172] picpiclink
        6. region e:234-468 [61173] picpiclink
        7. region g:14-233 [61176] picpiclink
        8. region g:234-470 [61177] picpiclink
      2. 1hr7 picpicxref
        complexed with zn; mutant
        1. region a:14-233 [61180] picpiclink
        2. region a:234-470 [61181] picpiclink
        3. region c:16-233 [61184] picpiclink
        4. region c:234-468 [61185] picpiclink
        5. region e:14-233 [61188] picpiclink
        6. region e:234-468 [61189] picpiclink
        7. region g:14-233 [61192] picpiclink
        8. region g:234-467 [61193] picpiclink
      3. 1hr8 picpicxref
        complexed with epe, zn; mutant
        1. region a:14-233 [61196] picpiclink
        2. region a:234-470 [61197] picpiclink
        3. region c:16-233 [61200] picpiclink
        4. region c:234-468 [61201] picpiclink
        5. region e:14-233 [61204] picpiclink
        6. region e:234-468 [61205] picpiclink
        7. region g:14-233 [61208] picpiclink
        8. region g:234-470 [61209] picpiclink
      4. 1hr9 picpicxref
        complexed with epe, zn; mutant
        1. region a:14-233 [61212] picpiclink
        2. region a:234-470 [61213] picpiclink
        3. region c:16-233 [61216] picpiclink
        4. region c:234-468 [61217] picpiclink
        5. region e:14-233 [61220] picpiclink
        6. region e:234-468 [61221] picpiclink
        7. region g:14-233 [61224] picpiclink
        8. region g:234-468 [61225] picpiclink
  3. Cytochrome bc1 core subunit 1 [63408]
    1. Cow (Bos taurus) [TaxId: 9913] [55997] (26)
      SQ P31800
      1. 1ppj picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with any, azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma
        1. region a:2-233 [104252] picpiclink
        2. region a:234-442 [104253] picpiclink
        3. region n:2-233 [104267] picpiclink
        4. region n:234-442 [104268] picpiclink
      2. 2a06 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1be3a1
        complexed with azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma, unl, uq
        1. region a:1-233 [125919] picpiclink
      3. 2a06 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1be3a2
        complexed with azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma, unl, uq
        1. region a:234-443 [125920] picpiclink
      4. 2a06 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1be3a1
        complexed with azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma, unl, uq
        1. region n:1-233 [125928] picpiclink
      5. 2a06 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1be3a2
        complexed with azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma, unl, uq
        1. region n:234-443 [125929] picpiclink
      6. 1pp9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma, uq
        1. region a:1-233 [104222] picpiclink
        2. region a:234-442 [104223] picpiclink
        3. region n:1-233 [104237] picpiclink
        4. region n:234-442 [104238] picpiclink
      7. 2fyu picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1be3a1
        complexed with fdn, fes, hem
        1. region a:1-233 [134392] picpiclink
      8. 2fyu picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1be3a2
        complexed with fdn, fes, hem
        1. region a:234-446 [134393] picpiclink
      9. 1ntm picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with fes, hem
        1. region a:1-233 [92121] picpiclink
        2. region a:234-446 [92122] picpiclink
      10. 1ntz picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with fes, hem, uq2
        1. region a:1-233 [92149] picpiclink
        2. region a:234-446 [92150] picpiclink
      11. 1l0l picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with fes, fmx, hem
        1. region a:1-233 [84482] picpiclink
        2. region a:234-446 [84483] picpiclink
      12. 1sqx picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1be3a1
        complexed with fes, hem, sma, uq2
        1. region a:1-233 [119035] picpiclink
      13. 1sqx picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1be3a2
        complexed with fes, hem, sma, uq2
        1. region a:234-446 [119036] picpiclink
      14. 1ntk picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with ay1, fes, hem
        1. region a:1-233 [92105] picpiclink
        2. region a:234-446 [92106] picpiclink
      15. 1l0n picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with fes, hem
        1. region a:1-233 [84498] picpiclink
        2. region a:234-446 [84499] picpiclink
      16. 1sqb picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with azo, fes, hem
        1. region a:1-233 [105890] picpiclink
        2. region a:234-446 [105891] picpiclink
      17. 1sqv picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1be3a1
        complexed with fes, hem, uhd, uq2
        1. region a:1-233 [119020] picpiclink
      18. 1sqv picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1be3a2
        complexed with fes, hem, uhd, uq2
        1. region a:234-446 [119021] picpiclink
      19. 1sqp picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1be3a1
        complexed with cdl, fes, hem, myx, pee, plx
        1. region a:1-233 [118995] picpiclink
      20. 1sqp picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1be3a2
        complexed with cdl, fes, hem, myx, pee, plx
        1. region a:234-446 [118996] picpiclink
      21. 1sqq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1be3a1
        complexed with fes, hem, ost, uq2
        1. region a:1-233 [119007] picpiclink
      22. 1sqq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1be3a2
        complexed with fes, hem, ost, uq2
        1. region a:234-446 [119008] picpiclink
      23. 1nu1 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with fes, hem, qno
        1. region a:1-233 [92167] picpiclink
        2. region a:234-446 [92168] picpiclink
      24. 1be3 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with fes, hec, hem
        1. region a:1-233 [58950] picpiclink
        2. region a:234-446 [58951] picpiclink
      25. 1bgy picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with fes, hec, hem
        1. region a:1-233 [58954] picpiclink
        2. region a:234-446 [58955] picpiclink
        3. region m:1-233 [58958] picpiclink
        4. region m:234-446 [58959] picpiclink
      26. 1qcr picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with hem
        1. region a:1-233 [59025] picpiclink
        2. region a:234-446 [59026] picpiclink
    2. Chicken (Gallus gallus) [TaxId: 9031] [55998] (3)
      1. 1bcc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with bog, fes, hem, pee, u10
        1. region a:4-232 [58946] picpiclink
        2. region a:233-445 [58947] picpiclink
      2. 2bcc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with bog, fes, hem, pee, sig, u10
        1. region a:4-232 [59049] picpiclink
        2. region a:233-445 [59050] picpiclink
      3. 3bcc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with amy, fes, hem, sig
        1. region a:4-232 [59056] picpiclink
        2. region a:233-445 [59057] picpiclink
    3. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [64304] (14)
      1. 3cx5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1kb9a1
        complexed with 6ph, 7ph, 8pe, 9pe, cn3, cn5, fes, hem, m3l, sma, suc, umq
        1. region a:27-239 [157076] picpiclink
      2. 3cx5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1kb9a2
        complexed with 6ph, 7ph, 8pe, 9pe, cn3, cn5, fes, hem, m3l, sma, suc, umq
        1. region a:240-457 [157077] picpiclink
      3. 3cx5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1kb9a1
        complexed with 6ph, 7ph, 8pe, 9pe, cn3, cn5, fes, hem, m3l, sma, suc, umq
        1. region l:27-239 [157092] picpiclink
      4. 3cx5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1kb9a2
        complexed with 6ph, 7ph, 8pe, 9pe, cn3, cn5, fes, hem, m3l, sma, suc, umq
        1. region l:240-457 [157093] picpiclink
      5. 1kb9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with cdl, fes, hem, pcf, pef, pie, sma, umq, uq6
        1. region a:27-239 [77311] picpiclink
        2. region a:240-457 [77312] picpiclink
      6. 2ibz picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1kb9a1
        complexed with fes, hem, sma, uq6
        1. region a:27-239 [137215] picpiclink
      7. 2ibz picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1kb9a2
        complexed with fes, hem, sma, uq6
        1. region a:240-457 [137216] picpiclink
      8. 1ezv picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with fes, hem, sma, uq6
        1. region a:27-239 [59541] picpiclink
        2. region a:240-456 [59542] picpiclink
      9. 3cxh picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1kb9a1
        complexed with 6ph, 7ph, 8pe, 9pe, cn6, fes, hem, m3l, sma, suc, umq
        1. region a:27-239 [157109] picpiclink
      10. 3cxh picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1kb9a2
        complexed with 6ph, 7ph, 8pe, 9pe, cn6, fes, hem, m3l, sma, suc, umq
        1. region a:240-457 [157110] picpiclink
      11. 3cxh picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1kb9a1
        complexed with 6ph, 7ph, 8pe, 9pe, cn6, fes, hem, m3l, sma, suc, umq
        1. region l:27-239 [157125] picpiclink
      12. 3cxh picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1kb9a2
        complexed with 6ph, 7ph, 8pe, 9pe, cn6, fes, hem, m3l, sma, suc, umq
        1. region l:240-457 [157126] picpiclink
      13. 1p84 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with 3pe, 3ph, cdl, dbt, fes, hem, pc1, umq, uq6
        1. region a:27-239 [87850] picpiclink
        2. region a:240-457 [87851] picpiclink
      14. 1kyo picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with fes, hem, m3l, sma
        1. region a:27-239 [73249] picpiclink
        2. region a:240-456 [73250] picpiclink
        3. region l:27-239 [73264] picpiclink
        4. region l:240-456 [73265] picpiclink
  4. Cytochrome bc1 core subunit 2 [63409]
    1. Cow (Bos taurus) [TaxId: 9913] [56000] (12)
      SQ P23004
      1. 1ppj picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with any, azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma
        1. region b:17-235 [104254] picpiclink
        2. region b:236-439 [104255] picpiclink
        3. region o:17-235 [104269] picpiclink
        4. region o:236-439 [104270] picpiclink
      2. 1pp9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma, uq
        1. region b:17-235 [104224] picpiclink
        2. region b:236-439 [104225] picpiclink
        3. region o:17-235 [104239] picpiclink
        4. region o:236-439 [104240] picpiclink
      3. 1ntm picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with fes, hem
        1. region b:17-235 [92123] picpiclink
        2. region b:236-439 [92124] picpiclink
      4. 1ntz picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with fes, hem, uq2
        1. region b:17-235 [92151] picpiclink
        2. region b:236-439 [92152] picpiclink
      5. 1l0l picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with fes, fmx, hem
        1. region b:17-235 [84484] picpiclink
        2. region b:236-439 [84485] picpiclink
      6. 1ntk picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with ay1, fes, hem
        1. region b:17-235 [92107] picpiclink
        2. region b:236-439 [92108] picpiclink
      7. 1l0n picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with fes, hem
        1. region b:17-235 [84500] picpiclink
        2. region b:236-439 [84501] picpiclink
      8. 1sqb picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with azo, fes, hem
        1. region b:17-235 [105892] picpiclink
        2. region b:236-439 [105893] picpiclink
      9. 1nu1 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with fes, hem, qno
        1. region b:17-235 [92169] picpiclink
        2. region b:236-439 [92170] picpiclink
      10. 1be3 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with fes, hec, hem
        1. region b:21-235 [58952] picpiclink
        2. region b:236-439 [58953] picpiclink
      11. 1bgy picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with fes, hec, hem
        1. region b:21-235 [58956] picpiclink
        2. region b:236-439 [58957] picpiclink
        3. region n:21-235 [58960] picpiclink
        4. region n:236-439 [58961] picpiclink
      12. 1qcr picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with hem
        1. region b:17-235 [59027] picpiclink
        2. region b:236-439 [59028] picpiclink
    2. Chicken (Gallus gallus) [TaxId: 9031] [56001] (17)
      1. 2a06 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1bccb1
        complexed with azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma, unl, uq
        1. region b:18-235 [125921] picpiclink
      2. 2a06 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1bccb2
        complexed with azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma, unl, uq
        1. region b:236-439 [125922] picpiclink
      3. 2a06 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1bccb1
        complexed with azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma, unl, uq
        1. region o:18-235 [125930] picpiclink
      4. 2a06 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1bccb2
        complexed with azi, bhg, cdl, fes, gol, hec, hem, pee, po4, sma, unl, uq
        1. region o:236-439 [125931] picpiclink
      5. 2fyu picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1bccb1
        complexed with fdn, fes, hem
        1. region b:18-235 [134394] picpiclink
      6. 2fyu picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1bccb2
        complexed with fdn, fes, hem
        1. region b:236-439 [134395] picpiclink
      7. 1sqx picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1bccb1
        complexed with fes, hem, sma, uq2
        1. region b:18-235 [119037] picpiclink
      8. 1sqx picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1bccb2
        complexed with fes, hem, sma, uq2
        1. region b:236-439 [119038] picpiclink
      9. 1sqv picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1bccb1
        complexed with fes, hem, uhd, uq2
        1. region b:18-235 [119022] picpiclink
      10. 1sqv picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1bccb2
        complexed with fes, hem, uhd, uq2
        1. region b:236-439 [119023] picpiclink
      11. 1sqp picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1bccb1
        complexed with cdl, fes, hem, myx, pee, plx
        1. region b:18-235 [118997] picpiclink
      12. 1sqp picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1bccb2
        complexed with cdl, fes, hem, myx, pee, plx
        1. region b:236-439 [118998] picpiclink
      13. 1sqq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1bccb1
        complexed with fes, hem, ost, uq2
        1. region b:18-235 [119009] picpiclink
      14. 1sqq picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1bccb2
        complexed with fes, hem, ost, uq2
        1. region b:236-439 [119010] picpiclink
      15. 1bcc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with bog, fes, hem, pee, u10
        1. region b:18-235 [58948] picpiclink
        2. region b:236-439 [58949] picpiclink
      16. 2bcc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with bog, fes, hem, pee, sig, u10
        1. region b:18-235 [59051] picpiclink
        2. region b:236-439 [59052] picpiclink
      17. 3bcc picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with amy, fes, hem, sig
        1. region b:18-235 [59058] picpiclink
        2. region b:236-439 [59059] picpiclink
    3. Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932] [64305] (14)
      1. 3cx5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ezvb1
        complexed with 6ph, 7ph, 8pe, 9pe, cn3, cn5, fes, hem, m3l, sma, suc, umq
        1. region b:17-218 [157078] picpiclink
      2. 3cx5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ezvb2
        complexed with 6ph, 7ph, 8pe, 9pe, cn3, cn5, fes, hem, m3l, sma, suc, umq
        1. region b:219-368 [157079] picpiclink
      3. 3cx5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ezvb1
        complexed with 6ph, 7ph, 8pe, 9pe, cn3, cn5, fes, hem, m3l, sma, suc, umq
        1. region m:17-218 [157094] picpiclink
      4. 3cx5 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ezvb2
        complexed with 6ph, 7ph, 8pe, 9pe, cn3, cn5, fes, hem, m3l, sma, suc, umq
        1. region m:219-368 [157095] picpiclink
      5. 1kb9 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with cdl, fes, hem, pcf, pef, pie, sma, umq, uq6
        1. region b:17-218 [77313] picpiclink
        2. region b:219-368 [77314] picpiclink
      6. 2ibz picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ezvb1
        complexed with fes, hem, sma, uq6
        1. region b:17-218 [137217] picpiclink
      7. 2ibz picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ezvb2
        complexed with fes, hem, sma, uq6
        1. region b:219-368 [137218] picpiclink
      8. 1ezv picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with fes, hem, sma, uq6
        1. region b:17-218 [59543] picpiclink
        2. region b:219-368 [59544] picpiclink
      9. 3cxh picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ezvb1
        complexed with 6ph, 7ph, 8pe, 9pe, cn6, fes, hem, m3l, sma, suc, umq
        1. region b:17-218 [157111] picpiclink
      10. 3cxh picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ezvb2
        complexed with 6ph, 7ph, 8pe, 9pe, cn6, fes, hem, m3l, sma, suc, umq
        1. region b:219-368 [157112] picpiclink
      11. 3cxh picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ezvb1
        complexed with 6ph, 7ph, 8pe, 9pe, cn6, fes, hem, m3l, sma, suc, umq
        1. region m:17-218 [157127] picpiclink
      12. 3cxh picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1ezvb2
        complexed with 6ph, 7ph, 8pe, 9pe, cn6, fes, hem, m3l, sma, suc, umq
        1. region m:219-368 [157128] picpiclink
      13. 1p84 picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with 3pe, 3ph, cdl, dbt, fes, hem, pc1, umq, uq6
        1. region b:17-218 [87852] picpiclink
        2. region b:219-368 [87853] picpiclink
      14. 1kyo picpicxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxrefxref
        complexed with fes, hem, m3l, sma
        1. region b:17-218 [73251] picpiclink
        2. region b:219-368 [73252] picpiclink
        3. region m:17-218 [73266] picpiclink
        4. region m:219-368 [73267] picpiclink
  5. Presequence protease 1, PREP1 [143498]
    duplication: comprises four domains of this fold; similar to the MPP alpha-beta heterodimer
    1. Thale cress (Arabidopsis thaliana) [TaxId: 3702] [143499] (8)
      SQ Q9LJL3 100-356! SQ Q9LJL3 357-624! SQ Q9LJL3 625-882! SQ Q9LJL3 883-1078
      1. 2fge picpic
        complexed with cl, mg, zn; mutant
        1. region a:540-797 [133430] picpiclink
      2. 2fge picpic
        complexed with cl, mg, zn; mutant
        1. region a:798-993 [133431] picpiclink
      3. 2fge picpic
        complexed with cl, mg, zn; mutant
        1. region a:272-539 [133432] picpiclink
      4. 2fge picpic
        complexed with cl, mg, zn; mutant
        1. region a:15-271 [133433] picpiclink
      5. 2fge picpic
        automatically matched to 2FGE A:540-797
        complexed with cl, mg, zn; mutant
        1. region b:540-797 [133434] picpiclink
      6. 2fge picpic
        automatically matched to 2FGE A:798-993
        complexed with cl, mg, zn; mutant
        1. region b:798-993 [133435] picpiclink
      7. 2fge picpic
        automatically matched to 2FGE A:272-539
        complexed with cl, mg, zn; mutant
        1. region b:272-539 [133436] picpiclink
      8. 2fge picpic
        automatically matched to 2FGE A:15-271
        complexed with cl, mg, zn; mutant
        1. region b:15-271 [133437] picpiclink
  6. Protease III [143500]
    duplication: comprises four domains of this fold
    1. Escherichia coli [TaxId: 562] [143501] (4)
      SQ P05458 24-263! SQ P05458 264-503! SQ P05458 504-732! SQ P05458 733-960
      1. 1q2l picpic
        complexed with pt, zn
        1. region a:504-732 [118731] picpiclink
      2. 1q2l picpic
        complexed with pt, zn
        1. region a:733-960 [118732] picpiclink
      3. 1q2l picpic
        complexed with pt, zn
        1. region a:264-503 [118733] picpiclink
      4. 1q2l picpic
        complexed with pt, zn
        1. region a:24-263 [118734] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk