Structural Classification of Proteins
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Fold: MutS N-terminal domain-like

beta(2)-alpha-beta(2)-alpha-beta(2); 2 layers, alpha/beta

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: MutS N-terminal domain-like [55266]
    beta(2)-alpha-beta(2)-alpha-beta(2); 2 layers, alpha/beta

Superfamilies:

  1. tRNA-intron endonuclease N-terminal domain-like [55267] (1)
    link to SUPERFAMILY database - Superfamily
    1. tRNA-intron endonuclease N-terminal domain-like [55268] (2)
      1. Tetrameric tRNA splicing endonuclease, N-terminal domain [55269]
        1. Archaeon Methanococcus jannaschii [TaxId: 2190] [55270] (1)
          1. 1a79 picpicxref
            complexed with au, so4
            1. region a:9-82 [39739] picpiclink
            2. region b:9-82 [39740] picpiclink
            3. region c:9-82 [39741] picpiclink
            4. region d:9-82 [39742] picpiclink
      2. Dimeric tRNA splicing endonuclease, domains 1 and 3 [103073]
        duplication: one subunit consists of two tetrameric tRNA splicing endonuclease subunit-like repeats
        1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [103074] (11)
          1. 1r0v picpicxref
            1. region a:140-214 [96744] picpiclink
            2. region b:140-214 [96747] picpiclink
            3. region c:140-214 [96750] picpiclink
            4. region d:140-214 [96753] picpiclink
          2. 1r11 picpicxref
            1. region a:3-60 [96774] picpiclink
            2. region a:140-214 [96775] picpiclink
            3. region b:3-60 [96778] picpiclink
            4. region b:140-214 [96779] picpiclink
          3. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1rlva3
            complexed with a23, du
            1. region a:5-63 [135297] picpiclink
          4. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1r0va3
            complexed with a23, du
            1. region a:143-217 [135298] picpiclink
          5. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1rlva3
            complexed with a23, du
            1. region b:4-62 [135301] picpiclink
          6. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1r0va3
            complexed with a23, du
            1. region b:142-216 [135302] picpiclink
          7. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1rlva3
            complexed with a23, du
            1. region c:4-62 [135305] picpiclink
          8. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1r0va3
            complexed with a23, du
            1. region c:142-216 [135306] picpiclink
          9. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1rlva3
            complexed with a23, du
            1. region d:5-63 [135309] picpiclink
          10. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
            automatically matched to d1r0va3
            complexed with a23, du
            1. region d:143-217 [135310] picpiclink
          11. 1rlv picpicxref
            1. region a:2-60 [97654] picpiclink
            2. region a:140-214 [97655] picpiclink
            3. region b:2-60 [97658] picpiclink
            4. region b:140-214 [97659] picpiclink
  2. DNA repair protein MutS, domain I [55271] (1)
    link to SUPERFAMILY database - Superfamily
    1. DNA repair protein MutS, domain I [55272] (2)
      1. DNA repair protein MutS, domain I [55273]
        1. Thermus aquaticus [TaxId: 271] [55274] (3)
          1. 1ewq picpicxrefxrefxref
            CASP4
            complexed with edo, so4
            1. region a:1-120 [39743] picpiclink
            2. region b:1001-1120 [39744] picpiclink
          2. 1fw6 picpicxrefxrefxref
            protein/DNA complex; complexed with adp, mg, so4
            1. region a:1-120 [39745] picpiclink
            2. region b:1001-1120 [39746] picpiclink
          3. 1nne picpicxrefxrefxref
            complexed with adp, bef, edo, so4
            1. region a:1-120 [85898] picpiclink
            2. region b:1001-1120 [85902] picpiclink
        2. Escherichia coli [TaxId: 562] [55275] (10)
          SQ P23909 2-800
          1. 1wb9 picpicxrefxrefxref
            automatically matched to d1ng9a4
            complexed with adp, mg; mutant
            1. region a:2-116 [120836] picpiclink
          2. 1w7a picpicxrefxrefxref
            complexed with atp, mo3
            1. region a:2-116 [109221] picpiclink
            2. region b:14-116 [109225] picpiclink
          3. 1e3m picpicxrefxrefxref
            complexed with adp, mo4
            1. region a:2-116 [39747] picpiclink
            2. region b:14-116 [39748] picpiclink
          4. 1oh6 picpicxrefxrefxref
            complexed with adp, mo4
            1. region a:2-116 [92990] picpiclink
            2. region b:14-116 [92994] picpiclink
          5. 1wbd picpicxrefxrefxref
            automatically matched to d1ng9a4
            complexed with adp, mg; mutant
            1. region a:2-116 [120844] picpiclink
          6. 1wbb picpicxrefxrefxref
            automatically matched to d1ng9a4
            complexed with adp, mg; mutant
            1. region a:2-116 [120840] picpiclink
          7. 1ng9 picpicxrefxrefxref
            complexed with adp, mo6; mutant
            1. region a:1-116 [80483] picpiclink
            2. region b:9-116 [80487] picpiclink
          8. 1oh7 picpicxrefxrefxref
            complexed with adp, mo4
            1. region a:2-116 [92998] picpiclink
            2. region b:14-116 [93002] picpiclink
          9. 1oh5 picpicxrefxrefxref
            complexed with adp, mo4
            1. region a:2-116 [92982] picpiclink
            2. region b:14-116 [92986] picpiclink
          10. 1oh8 picpicxrefxrefxref
            complexed with adp, mo4
            1. region a:2-116 [93006] picpiclink
            2. region b:14-116 [93010] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk