Structural Classification of Proteins
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Family: tRNA-intron endonuclease N-terminal domain-like

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: MutS N-terminal domain-like [55266]
    beta(2)-alpha-beta(2)-alpha-beta(2); 2 layers, alpha/beta
  4. Superfamily: tRNA-intron endonuclease N-terminal domain-like [55267]
    link to SUPERFAMILY database - Superfamily
  5. Family: tRNA-intron endonuclease N-terminal domain-like [55268]

Protein Domains:

  1. Tetrameric tRNA splicing endonuclease, N-terminal domain [55269]
    1. Archaeon Methanococcus jannaschii [TaxId: 2190] [55270] (1)
      1. 1a79 picpicxref
        complexed with au, so4
        1. region a:9-82 [39739] picpiclink
        2. region b:9-82 [39740] picpiclink
        3. region c:9-82 [39741] picpiclink
        4. region d:9-82 [39742] picpiclink
  2. Dimeric tRNA splicing endonuclease, domains 1 and 3 [103073]
    duplication: one subunit consists of two tetrameric tRNA splicing endonuclease subunit-like repeats
    1. Archaeon Archaeoglobus fulgidus [TaxId: 2234] [103074] (11)
      1. 1r0v picpicxref
        1. region a:140-214 [96744] picpiclink
        2. region b:140-214 [96747] picpiclink
        3. region c:140-214 [96750] picpiclink
        4. region d:140-214 [96753] picpiclink
      2. 1r11 picpicxref
        1. region a:3-60 [96774] picpiclink
        2. region a:140-214 [96775] picpiclink
        3. region b:3-60 [96778] picpiclink
        4. region b:140-214 [96779] picpiclink
      3. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1rlva3
        complexed with a23, du
        1. region a:5-63 [135297] picpiclink
      4. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1r0va3
        complexed with a23, du
        1. region a:143-217 [135298] picpiclink
      5. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1rlva3
        complexed with a23, du
        1. region b:4-62 [135301] picpiclink
      6. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1r0va3
        complexed with a23, du
        1. region b:142-216 [135302] picpiclink
      7. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1rlva3
        complexed with a23, du
        1. region c:4-62 [135305] picpiclink
      8. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1r0va3
        complexed with a23, du
        1. region c:142-216 [135306] picpiclink
      9. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1rlva3
        complexed with a23, du
        1. region d:5-63 [135309] picpiclink
      10. 2gjw picpicxrefxrefxrefxrefxrefxrefxrefxref
        automatically matched to d1r0va3
        complexed with a23, du
        1. region d:143-217 [135310] picpiclink
      11. 1rlv picpicxref
        1. region a:2-60 [97654] picpiclink
        2. region a:140-214 [97655] picpiclink
        3. region b:2-60 [97658] picpiclink
        4. region b:140-214 [97659] picpiclink
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MRC site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk