Structural Classification of Proteins
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Protein: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF from Thermus thermophilus [TaxId: 274]

Lineage:

  1. Root: scop
  2. Class: Alpha and beta proteins (a+b) [53931]
    Mainly antiparallel beta sheets (segregated alpha and beta regions)
  3. Fold: Bacillus chorismate mutase-like [55297]
    core: beta-alpha-beta-alpha-beta(2); mixed beta-sheet: order: 1423, strand 4 is antiparallel to the rest
  4. Superfamily: IpsF-like [69765]
    forms trimers with three closely packed beta-sheets; possible link between the YjgF-like (d.79.1) and 4'-phosphopantetheinyl transferase superfamilies (d.150.1)
    link to SUPERFAMILY database - Superfamily
  5. Family: IpsF-like [69766]
  6. Protein: 2C-methyl-D-erythritol 2,4-cyclodiphosphate synthase IspF [69767]
  7. Species: Thermus thermophilus [TaxId: 274] [82720]

PDB Entry Domains:

  1. 1iv3 picpic
    complexed with mg; mutant
    1. chain a [76828] picpiclink
    2. chain c [76830] picpiclink
    3. chain d [76831] picpiclink
    4. chain b [76829] picpiclink
    5. chain e [76832] picpiclink
    6. chain f [76833] picpiclink
  2. 1iv4 picpic
    complexed with c5p, mg; mutant
    1. chain a [76834] picpiclink
    2. chain c [76836] picpiclink
    3. chain d [76837] picpiclink
    4. chain b [76835] picpiclink
    5. chain e [76838] picpiclink
    6. chain f [76839] picpiclink
  3. 1iv2 picpic
    complexed with cdp, mg; mutant
    1. chain a [76822] picpiclink
    2. chain c [76824] picpiclink
    3. chain d [76825] picpiclink
    4. chain b [76823] picpiclink
    5. chain e [76826] picpiclink
    6. chain f [76827] picpiclink
  4. 1iv1 picpic
    1. chain a [76816] picpiclink
    2. chain c [76818] picpiclink
    3. chain d [76819] picpiclink
    4. chain b [76817] picpiclink
    5. chain e [76820] picpiclink
    6. chain f [76821] picpiclink

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site Generated from scop database 1.75 with scopm 1.101 on Wed Jun 3 10:42:06 2009
Copyright © 1994-2009 The scop authors / scop@mrc-lmb.cam.ac.uk